Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02578 ATGATCATAGAACGCAGCAAGATGAAGGAGAAGAAGCAGCTTGTTTTCCCAGTGTTTTACCATGTAGATCCCTCAGATATACGACACGAGAGAAAAAGCTTCGGAAAACACATGAAGGCACATGAAAATGAGATTGGAAAAGAATCACAGAAAATGCAGGCTTGGAGGTCAGCCTTGTCTCAAGCAGTTGACTTCCCAGGGAGGCATATTACCACCGGGGATGATGAAAGCCATCGTATTGAAGAAATTGTTGGGAAGGTCCATAAATATATAACTCCTAAACCTTTATATAGTGGTCAAAACCCTGTTGGACTTGAGGCCTGCATAGAAGAAGTTATGTCACTTTTGGACATGAAGCCTTATGATAAAACTGTAAGAATGTTGGGCATATATGGACTTGGTGGAATTGGAAAAACGGAACTTGCCAAAGCTTTGTATAACAAAATTGTACAACACTTTGATGCTGCAAGTTTTCTTTCCGATGTTAGAGAAAAATCAAACAGAATCAATGGCATGGAAGATCTACAAAAGACACTTTTATCTGAGATGTTTGAGGAGTTGGAAACTAAATTGGGAAGTACAATTAAAGGAATGGGTGAAATAAAACAAAAGCTTCAGAAAAAGAAAGTTCTTTTGGTTCTTGATGACGTTGGTGATAAAGACCAGTTAGAAAAGTTGGCAGGAGGGTGTAATTGGTTTGGTCCAGGTAGTAGGATCATTATAACGACAAGGGAAGAAAATGTGCTAATTGCTCACCAAGTTAAACCTAAGTATGAAATGAAGGAACTTGATGACAAACATTCTTTACAGCTATTTTGTTGGAATGCATTCAGACAAAGTTATCCTAAAACAGGTTTTGAAGATGTGTCTGTGCGTGCTGTAGATTACGCCAAAGGTCTTCCACTGGCTTTAAAAGTGATAGGCTCTGATTTAGCTGCTTTTCATGAAAGTTTAGAAGATTGGGAAATGGCAATGAAAGAATATGAGAAGACTCCAAATAGAAAGATTCAAGATGTGCTTAAAATAAGCTATGATAGATTGGATGATAATGCCAAACAAATTTTCTTGGACATAGCTTGCTTCTTTAAAGGGGAGAGAATGGAATATGTGAAAAAGATACTTAAAGAATTTTTTCCAACAACCAACATGAAAGTACTTCTTAATAAATCTCTCATAACTATCGAGTATGACTGCCTGAAGATGCATGATCTAATACAAGATATGGGTAGAGAGATTGTTAAGAAGGAATCAATAAATCCTGCTAAACGTAGCAGAATATGGTATTATGAAGATGCTATTGAAATACTAACCAAAGATTATGGAAATGATAAGATTCAAGGGATTATGCTTGATCCCCCTCAACGAAAAAAAGTAGAATGGAATGGTACTGCGTTGGTGAAGATGGAATGTCTCAGAATTCTCATTGTTCGAAACACATCGTTTTCATCTGAACTTGAACATTTACCAAATTATTTAAGACTTCTTGACTGGGAAGAGTGTCCTTCAAAGTCTTTCCCACCAAAATTTAATCCAGAGCACATCATTGTTTTAAATTTGCCTAGAAGTCGTCTAACATTGGAAGAGCCATTTAAGAAATTTCCATGCTTGACTATTATGGACTTTTCATATAACCAAAGTATCAAAAAAATACCTGATATGTCTGAACTTCAGATTCTAAGAGAACTGAGACTTGATCATTGTAGAGAGCTAACTGCAGTACATGAATCTGTTGGTTTGCTAAAAAGGCTTGCTCATTTAAGTGTTTCAGGATGCATAAAACTCAAAAAATTCGTGTCTGAAATGTTTCTGCCGTCTTTAGAAGTCTTTGACCTTAATTTATGTGAAAGCCTTGGTCACTTCCCGGAGATAAGGCAAGAAATGACAAAGCCATTGAAGATTTATATGATAAATACTGCTATTCAAGAGCTTCCAGAATCCATTGGTAAACTTACTGGGCTTGAATGTATAGACATATCAAATAACAGGGAACTTAAATATCTACCAAGCAGCTTATTCATGTTGCCAAATGTTGTTTCCCTCAAAATCGAAGCATGCTCCAAACTTCGAGAATCCTTCAGAAGTTTGGTGCAGCACCCTTCAAAAGCCAATGTTCGTCCAAAATTACAATCACTGAATGTCGAAAATGGTAACTTGTCTGATGAAGATCTTCTTGCTATTCTTTGCTATTTTCCAAATTTAAAAGAATTGATTGCTTCAGAGAACAATTTTGTTTCTATCCCTTCATGCATCAAGGAATGTGGTGACTTGACAAGTCTCGAATTGAATGGATGTAAGAAACTTAAAAAAATTCCTGAATTCACTAACTTGACAATTCTTGATGTTCATCATTGTTTCAAGCTTGAAGAAATTTCAGAGTTGTCTTCTAGTGTTCAGAAAGTAGACGCAAGATTTTGTTTCAAGTTAACTAGAGAGACATCAGACATGTTATGGAATCAGGTGAAGAAGGAAGGGGTACGTGGAATAGAAGTGGTGATGCCATTTACAACTGAGATTCCAGAATGGTTTAACTATGTGGGGGTCCAAAGGTATCCTCGTTTCTGGGTTCGTAAGAAGTTCCCTAACATTGCTCTAGCCATGATCTTCCACTTCCAAGATGAGAGTGAAAGGGACAAATTTGCTCGTCGTCGCGTTGTTGATCTGCGTTTACTTATCAACGGTCAATATGTTCCTTGCAAAAGGTCTCGCAAATTCAGAATTGAAGCAGAACACATCTTGATCTTTGATCTACGAGTTTTGTTCAGTGACAAGGAGTGGCTTGGCCTTGACCGACTTCTGGAGGAGGAGTGGAATCTGGTGCAGATTGCGTATAAAGCCACTTCCTCCTTCGTGATAAGTGGTTGGGGAGCTTTTGTGTATGAAGAGAAAACCAAAATGGATGATCTCCTATTCGCTTCTCCCAATCCCATGTATTCAGACGAGATGCCACTGGCAATAGTTCCTACAAAAGATGATATGGAGGAATATAAAATGATCATAGAGAGTCTAGGTTTGGACAAATCATATAAGAAGACGTTGAATGAATGGCTGGACAACAAAGGAAGAGGGGGGTTTGAAGGAGTGGCTGAAGACGATTCCATGCATATTGTATTGGCAGAACTACAGAGAATATCCCAGGATGCTGAGAATGCATTAAAATCAATAGGGTCAGCTTTAAAAGATCCAAAATCCAAGCTGAGGCGGATTCTAGATGAGCTAAAAAATGATGATGGAAAGCCTAAAGTTACTATCATAGGTGATCTAGCGTTGATAACACTAAAGGATCCAGTGAAACTGCATAATGTAGGAAAAGCTTCAACCTCTGGCCATACGGGAAGTGAGGAGGAGGAGGAGGAAGGCTATGATCATCAGCTGGAAGAAATAGTGAGAGAGATGTTTGATGATGGAATGACGGATGGACTTCTTGAGGCACAGAATAGATTTCCTTCTCTTGATATTGTTGAAACCATAAGAGCTGCTTTGGAGAAGGGTTATAGGGTTAGATGGAGACCTGAAGATGAAGTGCAAACATCGATTGAAACTAGGACATACATCAATGGAATTTACAGTGGACTCTTAGAAGCAAAGCTGAGGTTTCCTGATTTGGACATGTGGGCAACAATTAATACTGTGGCAAAAAGGAAAGGGATAAGAGAAACTTTTGGATCACCCACTGAAGCAAAGCTGAGGCTTCCACGTTTGGATTGGACTACAGGGACACCTCCTCACGACCCTCTGATGCAAATATTCATGGTGATGAAGCAACAAAGTACTTTGGAACCGGAGGTCAAAAGTAAACTCTTTTGGAAGTTGAAGGAGGAACACCAAGCTCTGCGTGACAAGTTTGCACAACTTGAAAATGAAAATGAAAATGCTGCTCAGAACACAGCCAGCTCTGGGAAAAATCAATATGATAAGTTTGTTGGGAAGAGAGAAGACAAACTTGATCGTGTGGCACAGTATGAGAAGGTTAGTGTTGTTTTGAAAGGAAGAGGTGAAGAATTAGGGAAGCTATACGATGGTGGGGTTGAAGGGTTCCAGGAATCAGAGGAGTTTGAAGATGTGATGAGTGCAATATACTTGAATGGACTTAGGGGAGGAGTCCTTGAAGCACGTGCCATCTTACTTACTCTCAGTACGGACATAGAAACTGATGAAGGTGTGACTGAGGATCCCGTGATTGTAAAAGAAGCTCCAACCTCTGGCCATAAGGAAAGTGAGGAGGAGGAAGCAATAACGCGGGAATTATGGTATGAAGGAATGACAGATGGAGTTCTTGAGGCACAAAATAGATTTCCTTCTCTAGATATTGCTGACACCATTAGCATTGCCTTGGGGAAGGGTTCTGGGATTGAATGGACACCTAAAGGGATGGAGATAATACCCTCAGCTGAAAATAGAACATACTTGAGTGGAGTTTATGGTGGACTCTTGGAAGCAAAGTTGAGGTTTCCTGATTTGGACGTGTTGGAAACACTAAATACAGTGGCAAATAGGAGAGGGATAAATACAACTTTTGTATCACCCCCAGAACCAAACCAGAAGATTCCACAATTGGATTGGACTACAGTGACACTTCCTCCTTCTCACGACCCTCTCATGCAAATATTCATGATGATGAATCAACAAAGTACGTCGGAATCCCAGGTCAGGAGTAAACTCTTCTCGAAGATGAAGGAGGAAACTCAAGTTCTGGGCAACAGATTTGCACAACTTGAAAAGGAAAATGAAAATGCTGCTCAGAACACAGCGAGCTCTTCCAAAAATCCATATGATGAACTGATTCAGAAATTCAACATTCTATATGATGAGTTTGTTGGGAAGAGACAAGGCAACCTTGATCATGTGGCAGAGTATGAGAAGGTTAGTGGTGTTTTGAAAGGAAGAGGTGAAGAATTAGAGAGGCTATTGAATGGTGTGGTTGAAAGGTTGCAAAAATCAGAGGCATTTGAGGATTTGATGAGTGTAATATACTTGAATGGACTCAGGGATGGAGTCCTTGAAGCACTTGTCATCTTACTTGCACTCCACTCGGACACAAAAACTGACGAACGTGTCAGTGATGAGGCTGCTAATAATGAAAACATTGACTAG 5091 0.394 MIIERSKMKEKKQLVFPVFYHVDPSDIRHERKSFGKHMKAHENEIGKESQKMQAWRSALSQAVDFPGRHITTGDDESHRIEEIVGKVHKYITPKPLYSGQNPVGLEACIEEVMSLLDMKPYDKTVRMLGIYGLGGIGKTELAKALYNKIVQHFDAASFLSDVREKSNRINGMEDLQKTLLSEMFEELETKLGSTIKGMGEIKQKLQKKKVLLVLDDVGDKDQLEKLAGGCNWFGPGSRIIITTREENVLIAHQVKPKYEMKELDDKHSLQLFCWNAFRQSYPKTGFEDVSVRAVDYAKGLPLALKVIGSDLAAFHESLEDWEMAMKEYEKTPNRKIQDVLKISYDRLDDNAKQIFLDIACFFKGERMEYVKKILKEFFPTTNMKVLLNKSLITIEYDCLKMHDLIQDMGREIVKKESINPAKRSRIWYYEDAIEILTKDYGNDKIQGIMLDPPQRKKVEWNGTALVKMECLRILIVRNTSFSSELEHLPNYLRLLDWEECPSKSFPPKFNPEHIIVLNLPRSRLTLEEPFKKFPCLTIMDFSYNQSIKKIPDMSELQILRELRLDHCRELTAVHESVGLLKRLAHLSVSGCIKLKKFVSEMFLPSLEVFDLNLCESLGHFPEIRQEMTKPLKIYMINTAIQELPESIGKLTGLECIDISNNRELKYLPSSLFMLPNVVSLKIEACSKLRESFRSLVQHPSKANVRPKLQSLNVENGNLSDEDLLAILCYFPNLKELIASENNFVSIPSCIKECGDLTSLELNGCKKLKKIPEFTNLTILDVHHCFKLEEISELSSSVQKVDARFCFKLTRETSDMLWNQVKKEGVRGIEVVMPFTTEIPEWFNYVGVQRYPRFWVRKKFPNIALAMIFHFQDESERDKFARRRVVDLRLLINGQYVPCKRSRKFRIEAEHILIFDLRVLFSDKEWLGLDRLLEEEWNLVQIAYKATSSFVISGWGAFVYEEKTKMDDLLFASPNPMYSDEMPLAIVPTKDDMEEYKMIIESLGLDKSYKKTLNEWLDNKGRGGFEGVAEDDSMHIVLAELQRISQDAENALKSIGSALKDPKSKLRRILDELKNDDGKPKVTIIGDLALITLKDPVKLHNVGKASTSGHTGSEEEEEEGYDHQLEEIVREMFDDGMTDGLLEAQNRFPSLDIVETIRAALEKGYRVRWRPEDEVQTSIETRTYINGIYSGLLEAKLRFPDLDMWATINTVAKRKGIRETFGSPTEAKLRLPRLDWTTGTPPHDPLMQIFMVMKQQSTLEPEVKSKLFWKLKEEHQALRDKFAQLENENENAAQNTASSGKNQYDKFVGKREDKLDRVAQYEKVSVVLKGRGEELGKLYDGGVEGFQESEEFEDVMSAIYLNGLRGGVLEARAILLTLSTDIETDEGVTEDPVIVKEAPTSGHKESEEEEAITRELWYEGMTDGVLEAQNRFPSLDIADTISIALGKGSGIEWTPKGMEIIPSAENRTYLSGVYGGLLEAKLRFPDLDVLETLNTVANRRGINTTFVSPPEPNQKIPQLDWTTVTLPPSHDPLMQIFMMMNQQSTSESQVRSKLFSKMKEETQVLGNRFAQLEKENENAAQNTASSSKNPYDELIQKFNILYDEFVGKRQGNLDHVAEYEKVSGVLKGRGEELERLLNGVVERLQKSEAFEDLMSVIYLNGLRDGVLEALVILLALHSDTKTDERVSDEAANNENID* 1697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02578 1696 ProSiteProfiles TIR domain profile. 1 91 IPR000157 GO:0007165
Phac8g02578 1696 Coils Coil 1561 1581 - -
Phac8g02578 1696 Coils Coil 1267 1294 - -
Phac8g02578 1696 Gene3D - 93 256 IPR027417 -
Phac8g02578 1696 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 358 IPR027417 -
Phac8g02578 1696 Gene3D - 1 92 IPR035897 -
Phac8g02578 1696 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 65 IPR035897 -
Phac8g02578 1696 Coils Coil 311 331 - -
Phac8g02578 1696 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 622 IPR044974 GO:0006952
Phac8g02578 1696 PRINTS Disease resistance protein signature 601 617 - -
Phac8g02578 1696 PRINTS Disease resistance protein signature 204 218 - -
Phac8g02578 1696 PRINTS Disease resistance protein signature 127 142 - -
Phac8g02578 1696 PRINTS Disease resistance protein signature 297 311 - -
Phac8g02578 1696 Gene3D Ribonuclease Inhibitor 632 821 IPR032675 -
Phac8g02578 1696 Gene3D Ribonuclease Inhibitor 459 631 IPR032675 -
Phac8g02578 1696 Pfam TIR domain 7 87 IPR000157 GO:0007165
Phac8g02578 1696 Gene3D - 262 348 IPR042197 -
Phac8g02578 1696 Pfam NB-ARC domain 108 345 IPR002182 GO:0043531
Phac8g02578 1696 SUPERFAMILY L domain-like 400 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02578 Phac-Chr8 35054544 35061768 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02578 13 688 WRKY Transcription Factor Family AT4G12020 33.048 8.11e-87 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02578 - - pvu:PHAVU_008G194700g 2529.59