Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02577 ATGGATGTGGCCAAGTTACACAACACTGATGATGAGGACAAGAAAGAAGATGAAGTTGTGCTTCCAGGGTTTAGATTCCACCCAACAGATGAAGAGCTTGTGGGGTTTTATCTCAGGCGAAAGGTGGAGAAGAAGCCTCTCAGAATTGAACTCATCAAACAGATTGACATCTACAAATATGATCCATGGGATCTTCCAAAAGCAAGTTCTGTGGGGGAGAAGGAATGGTACTTCTTCTGCATAAGAGGGAGAAAGTACAGGAACAGCATAAGGCCTAATAGAGTAACAGGATCTGGATTTTGGAAAGCCACAGGGATTGATAAGCCTATATACTGTGTTAAAGAACCCCATGAATGCATTGGTCTGAAGAAATCATTGGTGTATTACCGTGGAAGTGCTGGAAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGTCTCCCACCCAATGGAAAATCTACCAATACTCCACAACCTAATCACATTCAAGAAGCTGAAGTGTGGACGCTGTGTCGAATATTGAAACGAGTCCCATCTTACAAGAAGTACACACCAAATTTGAAAGACTCAGCCACAAACTCGTCAAGTTCCAAAACATGCAGTTTAGAATCTGACAACAGCAAGCCATACTTGACTTTCACAGACTCACCATCATCACTGCTCCTCCAACAGAATGAAATGAAGAAACCAGTTTTTGGACATGGTCATCTACCTCACCCTCCAACATCCTTCTCTTACTCATCTTTTTGGAATCATCAGAATCTGGAATTTCCTCATGAGAATTGGGATGATCTCACATCTGTGGTTCAGTTTGCTGTTGATCCATCCAGAGTTTCTCATCATTGTAAAGACTCTAATAAATTTTGA 870 0.4161 MDVAKLHNTDDEDKKEDEVVLPGFRFHPTDEELVGFYLRRKVEKKPLRIELIKQIDIYKYDPWDLPKASSVGEKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIYCVKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKSTNTPQPNHIQEAEVWTLCRILKRVPSYKKYTPNLKDSATNSSSSKTCSLESDNSKPYLTFTDSPSSLLLQQNEMKKPVFGHGHLPHPPTSFSYSSFWNHQNLEFPHENWDDLTSVVQFAVDPSRVSHHCKDSNKF* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02577 289 MobiDBLite consensus disorder prediction 186 206 - -
Phac8g02577 289 SUPERFAMILY NAC domain 19 176 IPR036093 GO:0003677|GO:0006355
Phac8g02577 289 Gene3D NAC domain 29 180 IPR036093 GO:0003677|GO:0006355
Phac8g02577 289 Pfam No apical meristem (NAM) protein 22 148 IPR003441 GO:0003677|GO:0006355
Phac8g02577 289 FunFam NAC domain-containing protein 35 29 180 - -
Phac8g02577 289 ProSiteProfiles NAC domain profile. 20 177 IPR003441 GO:0003677|GO:0006355
Phac8g02577 289 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02577 Phac-Chr8 35012638 35015613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02577 10 178 NAC Transcription Factor Family AT5G39820 59.043 5.41e-76 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac8g02577 NAM 4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02577 - - gmx:100784323 476.478