Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02556 ATGGCGAATGAGAAGGATCGTTTTTATGACCCCTTTCATTACAACCACCATGAACATCAACTCAACCTCTCTTCAAGCTTTCCATCCTTTAGGGACAACAACTCTGCACCAATTACCACACAAAACTTTCAAGGCTTTCATCATAGTCCTTCTCATCATCGCACCACTTTCACTGACTGCTTACATGGTTCCATGGATTACAACACCCTCTCTAGAGCCTTTGACATGTCTTGCTCATCATCTGAAGTCATCTCCTCCATTGATGAAAACCCCAAGAAGCCTGGTGCAGGAGACTCAGCAGGGATCAGTGGGAACCAGTCAACACCCAATTCATCGGTCTCCTCCTCGTCCAACGAAGCTGAGGCACTCATAGAAGAAGACTCAACCAAAAGCCAGAAGAAAGATAAGCAACCAAAAGGGTGCCAAGATGCAGAAGAAAAGCCTAAGAAAGAGAACAAGTCTAAAAAGAAAGAGAAAAAGGCAAGAGAGCCTCGTTTTGCCTTCTTGACTAAAAGTGAGATCGATAACCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCAGTCAAGAATAGTCCCTACCCAAGGAGCTACTATAGGTGCACCAGTCAGAAGTGCAGTGTAAAGAAAAGGGTGGAAAGATCATTCCAAGATCCATCAGTAGTGATCACAACATATGAAGGGCAACACAACCATCACTGTCCAGCAACACTAAGGGGCAGTGCAGCCAGCATGTTGTCAGCACCTCCCTTTTTTGGTTCCTCTTATATGGGCTCAAGCTTACCCCAAGATTTTCTTGCTCAGTTGCTTCCAAGTTATAGCCAAAACGATCACCCAAATCCAATGTTCCACCAAAACCTTTCCCATAATCTCCATCTCCAGCCGCAACAACATCAACAACACCATCACCAGCACCAGTTCCAACTACCTCGTGACTATGGTTTGTTGCAAGACCTACTGCCACCATCATTCCCAGCCAAACAAGAGCCATGA 999 0.4505 MANEKDRFYDPFHYNHHEHQLNLSSSFPSFRDNNSAPITTQNFQGFHHSPSHHRTTFTDCLHGSMDYNTLSRAFDMSCSSSEVISSIDENPKKPGAGDSAGISGNQSTPNSSVSSSSNEAEALIEEDSTKSQKKDKQPKGCQDAEEKPKKENKSKKKEKKAREPRFAFLTKSEIDNLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCSVKKRVERSFQDPSVVITTYEGQHNHHCPATLRGSAASMLSAPPFFGSSYMGSSLPQDFLAQLLPSYSQNDHPNPMFHQNLSHNLHLQPQQHQQHHHQHQFQLPRDYGLLQDLLPPSFPAKQEP* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02556 332 MobiDBLite consensus disorder prediction 85 164 - -
Phac8g02556 332 Pfam WRKY DNA -binding domain 178 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g02556 332 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 56 299 IPR044810 GO:0003700
Phac8g02556 332 SMART WRKY_cls 177 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g02556 332 MobiDBLite consensus disorder prediction 100 122 - -
Phac8g02556 332 Gene3D WRKY domain 162 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g02556 332 MobiDBLite consensus disorder prediction 123 164 - -
Phac8g02556 332 SUPERFAMILY WRKY DNA-binding domain 170 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g02556 332 ProSiteProfiles WRKY domain profile. 172 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g02556 332 FunFam WRKY transcription factor 57 163 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02556 Phac-Chr8 34820571 34823619 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02556 1 332 WRKY Transcription Factor Family AT4G18170 43.266 2.18e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac8g02556 WRKY 1.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02556 - - gmx:100806016 464.536