Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02549 ATGCAGGAGCCCCTCTTGAACTCTTGCTCCAGAGAAGAAGAAACAGACTCACCACCCAAGGAACTATCTGTCCATGGTCTTGATCTTGCCTCATCACTATTCCAATCTAGTACGCCTCATACCACCAATGAAGCTAAGAGTTCTTTTAACCTCAGACCCAACTTGGCCTGCATGAAAGGAAGGTTTATCCAGCGTTCTCGTTCTGCACCATCTTTATTATTTGCTGAAACGGCGGTAGATTTTGAAGAGCCCTCTGAACCGCACAAGTCATCAACTTTAATAGTTAGACTATCTTTTATTGGTGTTTTCTTGTATGTGGCAACTGGGGTAGCAGTGTACATGATTACTGGGAGTTTCAGGGGCACTACCACTTTCAGGCCTTTGGATGCTGTGTACTTTACAATGGTAACTCTCTGCACTATTGGATATGGAGATATCGTTCCTGACTCCACTTTTACCAAAGTCTTTACATGTGGTTTCATTTTAGTGGGTTTTGGATTTATTGGTTTTCTGCTGAATGTGTTGGTTGCACACATTTGCGATACACAAGAGGCATTCTTGTTGAACATGATGGATGAGAATCGATATAAGAAAATTCTCAGGGCGTATATGGTTGATGAAGAGAAAGGAAGAATGAGGATAAGAACCAAAGTTTGTCTGGCTTTGGCTGTTGTCATTAGCTGCATTGCTATAGGAACAGTCACAATGCACTTTGTTGAGGACCTGAATTGGGATGACAGTATTTATCTCTCCATTACCTCTGTTACAACGGTTGGTTATGGGGATATTTCTATCAGAACAGTAGCCGGAAGATGCTTTGCGATTATATGGCTTTTGGTAAGCACATTGGCTGTTGCCAGGGCCTTTTTATACCTCACAGAATATAGTATTCACAAAAGAAATCGTAACATGGCAAAATGGGTTCTTCAGAAGAAGATAACCTTGTCAGATTTGGCGGCTGCAGACCTTGATAATGATGGATCAATCAGCAAGTCCGAATTTGTCATATACAAGCTCAAGCAAATGGGGAAGATTACAGAGTTAGACATTCTGCAAATAAGTAAACAATTTGATTCCTTGGAACATGGCAAGTATGGCAAGATTACTCTTGCTGGTCTCATGGAAACTGTCTAA 1134 0.4127 MQEPLLNSCSREEETDSPPKELSVHGLDLASSLFQSSTPHTTNEAKSSFNLRPNLACMKGRFIQRSRSAPSLLFAETAVDFEEPSEPHKSSTLIVRLSFIGVFLYVATGVAVYMITGSFRGTTTFRPLDAVYFTMVTLCTIGYGDIVPDSTFTKVFTCGFILVGFGFIGFLLNVLVAHICDTQEAFLLNMMDENRYKKILRAYMVDEEKGRMRIRTKVCLALAVVISCIAIGTVTMHFVEDLNWDDSIYLSITSVTTVGYGDISIRTVAGRCFAIIWLLVSTLAVARAFLYLTEYSIHKRNRNMAKWVLQKKITLSDLAAADLDNDGSISKSEFVIYKLKQMGKITELDILQISKQFDSLEHGKYGKITLAGLMETV* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02549 377 ProSitePatterns EF-hand calcium-binding domain. 322 334 IPR018247 -
Phac8g02549 377 PRINTS Two pore domain K+ channel signature 256 265 IPR003280 GO:0005267|GO:0016020|GO:0071805
Phac8g02549 377 PRINTS Two pore domain K+ channel signature 136 164 IPR003280 GO:0005267|GO:0016020|GO:0071805
Phac8g02549 377 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 128 350 IPR003280 GO:0005267|GO:0016020|GO:0071805
Phac8g02549 377 Pfam Ion channel 224 293 IPR013099 -
Phac8g02549 377 Pfam Ion channel 102 176 IPR013099 -
Phac8g02549 377 Gene3D - 85 205 - -
Phac8g02549 377 Gene3D - 206 318 - -
Phac8g02549 377 SUPERFAMILY Voltage-gated potassium channels 190 312 - -
Phac8g02549 377 MobiDBLite consensus disorder prediction 1 23 - -
Phac8g02549 377 FunFam Two-pore potassium channel 3 201 315 - -
Phac8g02549 377 SUPERFAMILY Voltage-gated potassium channels 90 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02549 Phac-Chr8 34808451 34810565 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02549 59 375 Ion Channels AT4G18160 49.221 3.47e-104 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02549 K05389 - gmx:100789639 599.356