Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02548 ATGGATAGAAAGCAAGAACAAGAGAAGGAGAACTCAAACATGTCTAGCATTGATGTTACTATAATAACTCCCAAAGTCCCAAAAGCAGTTTCACCTGTTTCTTCTGCAGCAGAGGGGGACACCTTAAGGAGGCCACGTGGACGGCCAGCAGGGTCCAAAAACAAGCCTAAGCCACCCATAATTGTGACCAGAGATAGTGCTAATGCACTGAAGGCTCATGCCATGGAAGTGAGTTCAGGGTGTGATGTGAATGAAAGTTTGTTGAACTTTGCAAGGAGAAAGCAACGTGGCCTTTACATACTCAATGGGACAGGGTGTGTAACAAATGTAACACTGCGCCAGCCAGGCTCATCTGGTGCCATTGTCACCCTTCATGGTAGGTTTGAGATTCTGTCACTGCTGGGGTCAATCCTTCCCCCACCAGCCCCTCCAGGGATCACAGGCCTCACAATTTACTTGGCTGGTGCTCAAGGGCAAGTTGTGGGAGGTGCAGTGGTTGGTGCTTTGATTGCTTCGGGCCCTCTTGTAATCATGGCTGCATCATTCATGCATGCTACTTTCGATCGTCTGCCTTTGGAAGATGATGAAATTGCTGCTGCAATGCAGAATCAGCATTACCAAAATGGACGCACCCACCATCTTGATATTTCTGACTTGTATGCAATGCCACAGAACCTGCTCATGAATGGTACAATGCCCCCAGAGATATACTCCTGGGCACCAGGGCGGAACTTGTCAAAAACATGA 747 0.4819 MDRKQEQEKENSNMSSIDVTIITPKVPKAVSPVSSAAEGDTLRRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARRKQRGLYILNGTGCVTNVTLRQPGSSGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALIASGPLVIMAASFMHATFDRLPLEDDEIAAAMQNQHYQNGRTHHLDISDLYAMPQNLLMNGTMPPEIYSWAPGRNLSKT* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02548 248 PIRSF ESCAROLA 1 243 IPR014476 GO:0003680
Phac8g02548 248 Gene3D - 69 213 - -
Phac8g02548 248 ProSiteProfiles PPC domain profile profile. 67 205 IPR005175 -
Phac8g02548 248 SUPERFAMILY AF0104/ALDC/Ptd012-like 67 199 - -
Phac8g02548 248 FunFam AT-hook motif nuclear-localized protein 70 211 - -
Phac8g02548 248 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 8 210 IPR014476 GO:0003680
Phac8g02548 248 MobiDBLite consensus disorder prediction 1 60 - -
Phac8g02548 248 CDD DUF296 73 153 IPR005175 -
Phac8g02548 248 Pfam Plants and Prokaryotes Conserved (PCC) domain 72 182 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02548 Phac-Chr8 34799248 34800268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02548 26 247 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 73.214 1.26e-102 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02548 - - gmx:100804941 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g02548 8 34799248 34800268 Phac8g02548 8 34799248 34800268 ECH