Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02541 ATGCAGCAAGATCACAGAAAAAAGGGTTCAATGGAGATGGAATTTTTCTCTGATTATGGCGATGCCAACAGGTACAAAATTCAAGAGGTCATTGGGAAAGGAAGTTATGGTGTTGTTTGTTCAGCTATTGACACTCATACTGGCGAGAAAGTAGCAATTAAAAAGATACATGACATCTTCGAGCATGTATCTGATACTGCACGTATTCTTCGTGAGATAAAGTTGCTTAGACTTCTTCGACATCCTGATATTGTTGAAATTAAGCATGTTATGTTGCCTCCTTCAAGGAGGGACTTTAAAGATATTTATGTCGTTTTTGAGCTAATGGAGTCTGATCTGCATCAAGTCATAAAAGCCAATGATGACTTAACAAAAGAGCACTATCAATTTTTTCTTTACCAGTTACTTCGAGCATTGAAGTATATTCACACTGCAAATGTCTATCATCGAGACTTGAAGCCAAAGAATATATTAGCCAATGCAAACTGTAAACTTAAAATATGTGATTTTGGGTTAGCTCGAGTTGCTTTTAGTGACACACCAACAACTGTATTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCACCAGAGCTCTGTGGATCCTTTTACTCAAGGTATACTCCAGCAATTGATATTTGGAGTATAGGTTGCATCTTTGCTGAAGTATTGATAGGAAAGCCTCTTTTTCCTGGAAAAAATGTTGTCCATCAGTTGGATCTGATGACAGATCTGCTTGGTACTCCCTCACTGGATACTATATCCCGGGTACGCAATGATAAGGCACGGAGATACCTGACTAGTATGAGGAAAAAGCAGCCTATACCATTTGCACAAAAATTTCCTAATGCAGATCCTTTAGCGCTACGACTACTTGAAAAGTTGCTCGCCTTTGATCCGAAAGACCGGCCTACTGCTGAAGAGGCATTAGCTGATCCTTACTTCAAGGGACTTGCGAAAGTTGAGAGGGAACCATCATGCCAGCCTATTACAAAAATGGAGTTTGAATTTGAAAGGAGAAGAGTCACAAAGGAAGAAATTGGAGAGTTAATTTTTCGTGAGATTCTAGAGTACCATCCTCAACTATTGAAAGACTACATAAATGGAACAGAGAGAACTAATTTTCTTTACCCAAGTGCTGTTGATCAATTCAAAAAGCAGTTTGCTCATCTTGAGGAAACTGGTGGCAAAAGTAGTCCAGTTATTCTACCTGAAAGAAAGCATGTATCACTTCCCAGGTCAACAATTATACATTCAAATATAGTACCCACAAAAGAGCAATCAAATATTACTTCAAGCAAAATCAGGCAAACAACTGAGGAATACAGCAATAATTCCCGGGATACAGAAAATCCTGCCCCAAGGTCCATTCAAGCAAAACCTGGTAAAGTTGTTGGGCCGGTTATTCCATACGAGTATGCAAGTGTTGTCAAGGGTTCATATGAGCCCAGAACATTTATGAGAGGTTCTGTTCTTCCTTCTCAACCTACTCCCCCGACGAGTCATTATCAAAGATTAACCCCTGGGAAACAAGAAAGGTCAGCAACAGCAACAGAAGCTGACAAGTGTGTATCTTTACAATCAAAACTTGCACAGCAATGTTGTGTGAATGGCCAAATAGCACCAGAAATAGCTATAAATATTGATTCCAACCCTTTTTTCATGACACGAGCAGGAGTGAACAAGATAGAGCAGGATGACCGAATAGGCATTGACACAAAGTTGCTGCAATCAAAGGCTCATCAATATGGTGGGATTAGTACAACTGCTCATAGAAAGGTTGGATCGGTTCAGTATGGTATAACAAGGTTGTTCTAG 1821 0.3965 MQQDHRKKGSMEMEFFSDYGDANRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHVSDTARILREIKLLRLLRHPDIVEIKHVMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTVFWTDYVATRWYRAPELCGSFYSRYTPAIDIWSIGCIFAEVLIGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPIPFAQKFPNADPLALRLLEKLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPITKMEFEFERRRVTKEEIGELIFREILEYHPQLLKDYINGTERTNFLYPSAVDQFKKQFAHLEETGGKSSPVILPERKHVSLPRSTIIHSNIVPTKEQSNITSSKIRQTTEEYSNNSRDTENPAPRSIQAKPGKVVGPVIPYEYASVVKGSYEPRTFMRGSVLPSQPTPPTSHYQRLTPGKQERSATATEADKCVSLQSKLAQQCCVNGQIAPEIAINIDSNPFFMTRAGVNKIEQDDRIGIDTKLLQSKAHQYGGISTTAHRKVGSVQYGITRLF* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02541 606 MobiDBLite consensus disorder prediction 490 515 - -
Phac8g02541 606 FunFam Mitogen-activated protein kinase 15 118 - -
Phac8g02541 606 MobiDBLite consensus disorder prediction 419 462 - -
Phac8g02541 606 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02541 606 MobiDBLite consensus disorder prediction 419 454 - -
Phac8g02541 606 MobiDBLite consensus disorder prediction 491 515 - -
Phac8g02541 606 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Phac8g02541 606 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02541 606 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Phac8g02541 606 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02541 606 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Phac8g02541 606 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Phac8g02541 606 CDD STKc_TDY_MAPK 24 361 - -
Phac8g02541 606 FunFam Mitogen-activated protein kinase 111 339 - -
Phac8g02541 606 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Phac8g02541 606 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02541 Phac-Chr8 34758196 34764460 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02541 1 434 MAP Kinase Gene Family AT2G42880 87.327 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Phac8g02541 Pkinase 5.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02541 - - gmx:100811788 1035.4