Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02540 ATGCAGCAAGATCACAGAAAAAAGGGTTCAATGGAGATGGAATTTTTCTCTGATTATGGCGATGCCAACAGGTACAAAATTCAAGAGGTCATTGGGAAAGGAAGTTATGGTGTTGTTTGTTCAGCTATTGACACTCATACTGGCGAGAAAGTAGCAATTAAAAAGATACATGACATCTTCGAGCATGTATCTGATACTGCACGTATTCTTCGTGAGATAAAGTTGCTTAGACTTCTTCGACATCCTGATATTGTTGAAATTAAGCATGTTATGTTGCCTCCTTCAAGGAGGGACTTTAAAGATATTTATGTCGTTTTTGAGCTAATGGAGTCTGATCTGCATCAAGTCATAAAAGCCAATGATGACTTAACAAAAGAGCACTATCAATTTTTTCTTTACCAGTTACTTCGAGCATTGAAGTATATTCACACTGCAAATGTCTATCATCGAGACTTGAAGCCAAAGAATATATTAGCCAATGCAAACTGTAAACTTAAAATATGTGATTTTGGGTTAGCTCGAGTTGCTTTTAGTGACACACCAACAACTGTATTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCACCAGAGCTCTGTGGATCCTTTTACTCAAGGTATACTCCAGCAATTGATATTTGGAGTATAGGTTGCATCTTTGCTGAAGTATTGATAGGAAAGCCTCTTTTTCCTGGAAAAAATGTTGTCCATCAGTTGGATCTGATGACAGATCTGCTTGGTACTCCCTCACTGGATACTATATCCCGGGTACGCAATGATAAGGCACGGAGATACCTGACTAGTATGAGGAAAAAGCAGCCTATACCATTTGCACAAAAATTTCCTAATGCAGATCCTTTAGCGCTACGACTACTTGAAAAGTTGCTCGCCTTTGATCCGAAAGACCGGCCTACTGCTGAAGAGGCATTAGCTGATCCTTACTTCAAGGGACTTGCGAAAGTTGAGAGGGAACCATCATGCCAGCCTATTACAAAAATGGAGTTTGAATTTGAAAGGAGAAGAGTCACAAAGGAAGAAATTGGAGAGTTAATTTTTCGTGAGATTCTAGAGTACCATCCTCAACTATTGAAAGACTACATAAATGGAACAGAGAGAACTAATTTTCTTTACCCAAGTGCTGTTGATCAATTCAAAAAGCAGTTTGCTCATCTTGAGGAAACTGGTGGCAAAAGTAGTCCAGTTATTCTACCTGAAAGAAAGCATGTATCACTTCCCAGGTCAACAATTATACATTCAAATATAGTACCCACAAAAGAGCAATCAAATATTACTTCAAGCAAAATCAGGCAAACAACTGAGGAATACAGCAATAATTCCCGGGATACAGAAAATCCTGCCCCAAGGTCCATTCAAGCAAAACCTGGTAAAGTTGTTGGGCCGGTTATTCCATACGAGTATGCAAGTGTTGTCAAGGGTTCATATGAGCCCAGAACATTTATGAGAGGTTCTGTTCTTCCTTCTCAACCTACTCCCCCGACGAGTCATTATCAAAGATTAACCCCTGGGAAACAAGAAAGGAGTGAACAAGATAGAGCAGGATGA 1566 0.3953 MQQDHRKKGSMEMEFFSDYGDANRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHVSDTARILREIKLLRLLRHPDIVEIKHVMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTVFWTDYVATRWYRAPELCGSFYSRYTPAIDIWSIGCIFAEVLIGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPIPFAQKFPNADPLALRLLEKLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPITKMEFEFERRRVTKEEIGELIFREILEYHPQLLKDYINGTERTNFLYPSAVDQFKKQFAHLEETGGKSSPVILPERKHVSLPRSTIIHSNIVPTKEQSNITSSKIRQTTEEYSNNSRDTENPAPRSIQAKPGKVVGPVIPYEYASVVKGSYEPRTFMRGSVLPSQPTPPTSHYQRLTPGKQERSEQDRAG* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02540 521 MobiDBLite consensus disorder prediction 419 462 - -
Phac8g02540 521 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02540 521 MobiDBLite consensus disorder prediction 419 454 - -
Phac8g02540 521 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 365 - -
Phac8g02540 521 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02540 521 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Phac8g02540 521 MobiDBLite consensus disorder prediction 491 508 - -
Phac8g02540 521 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Phac8g02540 521 FunFam Mitogen-activated protein kinase 111 339 - -
Phac8g02540 521 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Phac8g02540 521 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Phac8g02540 521 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Phac8g02540 521 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02540 521 CDD STKc_TDY_MAPK 24 361 - -
Phac8g02540 521 MobiDBLite consensus disorder prediction 487 521 - -
Phac8g02540 521 FunFam Mitogen-activated protein kinase 15 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02540 Phac-Chr8 34758196 34764460 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02540 1 434 MAP Kinase Gene Family AT2G42880 87.327 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Phac8g02540 Pkinase 3.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02540 - - gmx:100781115 945.651