Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02510 ATGGGTTATTTATGTGATTTTTGTGGAGACCAGAGGTCATTGGTGTACTGCCGCAGTGATGCTGCATGCTTATGTTTGTCGTGTGATCGAAATGTTCATTCTGCTAATGCCCTATCTAGGCGTCATTCGAGAAACCTTCTATGTGAGAGATGTAATTTACAACCTGCTTTTGTGAGGTGTGATGAAGAGAAAATTTCACTTTGTCAGAACTGTGATTGGTTGGCTCATGGCACCTCACCGACTTCTTCGACACACAAGAGGCAGACAATCAATTGCTACTCTGGCTGCCCTTCAGCTGCAGAATTTTCTTCAATATGGTCCTTTTTCTTAGATATCCCTTCTATGGGTGAAGCGTGTGAGCAGGAACTGGGTTTGATGAGCATTAATGAGAATGGCAACAAGAGTGATTTGGTTCCTCCAGAAGGACAGAATGTGTCTGGTTCAGCTCAAGTGACGACAGATCTACCCACCAAGGTTAAATTTTGGGCCGGCACATCTTCAATACCTGTGTCAGGCTCAGAACCTCGTATTCTGGACCAGCCACCTGGGCCTGGCAATGAATGTATGCCCAAGTTGTACTGTCCTGGGAAAAAAATTTCTGGGATATGTGAAGATGATAATCTATATGATGATTTCATCATGGATGAAGTGGATCTAGAACTTGAGAACTACGAGGAACTTTTTGGGATGGCTCTCAGTCATTCTGAAGAGCTTTTTGAAAATGGTGGAATTGAGAGCTTATTTGAGGCAAAAGACATGTCTGCTAGTGTTGGTGAATCCCACTGTCAGGGTGCTGTTGTTGCTGAGGGATCGTCTGCTGGGTTGGTCAATGCTATCCAATCAGCATGCAGCAATGCAGCATCTGCAGATTCAATGTTGAGTACAAAAACTGAACCAATTGTTTGTTTTACGGGAAGGCAATCTCAATCAAACATTTCTTTTTCTGGTGTTACAAAAGATAGTGCTGGTGACTATCAAGACTGTGATGCTTCTTCAATGCTTCTCATGGGAGAGCCTCCCTGGTGTCCTCCTTGCCCTGAGAGTTCTCTGCATTCTGCCAACCGTAGCAACGCTGTAATGCGCTACAAGGAAAAGAAGAAGACCCGGAAGTTCGAGAAGAAAGTAAGGTATGCCTCTCGCAAGGCTAGGGCTGATGTCAGAAGGCGTGTGAAGGGCCGATTTGTTAAAGCCGGTGATGTCTATGACTATGACCCTTTGAGCCAAACCAGAAGCTTCTGA 1239 0.4479 MGYLCDFCGDQRSLVYCRSDAACLCLSCDRNVHSANALSRRHSRNLLCERCNLQPAFVRCDEEKISLCQNCDWLAHGTSPTSSTHKRQTINCYSGCPSAAEFSSIWSFFLDIPSMGEACEQELGLMSINENGNKSDLVPPEGQNVSGSAQVTTDLPTKVKFWAGTSSIPVSGSEPRILDQPPGPGNECMPKLYCPGKKISGICEDDNLYDDFIMDEVDLELENYEELFGMALSHSEELFENGGIESLFEAKDMSASVGESHCQGAVVAEGSSAGLVNAIQSACSNAASADSMLSTKTEPIVCFTGRQSQSNISFSGVTKDSAGDYQDCDASSMLLMGEPPWCPPCPESSLHSANRSNAVMRYKEKKKTRKFEKKVRYASRKARADVRRRVKGRFVKAGDVYDYDPLSQTRSF* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02510 412 ProSiteProfiles CCT domain profile. 355 397 IPR010402 GO:0005515
Phac8g02510 412 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 399 - -
Phac8g02510 412 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Phac8g02510 412 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Phac8g02510 412 CDD Bbox1_BBX-like 4 44 - -
Phac8g02510 412 CDD Bbox1_BBX-like 47 90 - -
Phac8g02510 412 Pfam CCT motif 355 397 IPR010402 GO:0005515
Phac8g02510 412 SMART bboxneu5 4 47 IPR000315 GO:0008270
Phac8g02510 412 SMART bboxneu5 48 90 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02510 Phac-Chr8 34455378 34465853 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02510 1 412 C2C2-CO-like Transcription Factor Family AT5G48250 56.028 8.72e-147 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Phac8g02510 CCT 2.5e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02510 - - gmx:100783016 733.406