Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02507 ATGGGCCTCTCAAGTCTGCCAGCGCCATCTGAAGGAGTATTATGTGTTCTTCTGGTGAACACTGTCTTGTCAATTTCCATATTTAAGGGCATTGTTAGGACAATCCTACACATTGTTGGAATCCATCTTTCATCATCCACCACTTCAGCCTCTTCACCAGATCCCTACCAAACTCCACCTGAGTCATTTGAATTCCATCTTAGTCCCTCTGAGAGTTACATCGAAGAGTTCAGAAGCCGGACACCAACACTCAGGTTTGACAGTGTGTGTTGCTGCAAACGACCTGAACATGACTGTTCTGTATGTCTCACTCAATTCGAACCAGAATCGGAGATTAACCGCTTATCGTGCGGCCATCTCTTCCACAAAGCTTGCTTGGAGAAGTGGCTGGACTACTGGAACATTACATGCCCACTTTGCAGGACTCCCTTGATGCCTGAAGATGACACACCTTGCTTTCAGTAA 465 0.4624 MGLSSLPAPSEGVLCVLLVNTVLSISIFKGIVRTILHIVGIHLSSSTTSASSPDPYQTPPESFEFHLSPSESYIEEFRSRTPTLRFDSVCCCKRPEHDCSVCLTQFEPESEINRLSCGHLFHKACLEKWLDYWNITCPLCRTPLMPEDDTPCFQ* 155
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02507 154 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 149 IPR013083 -
Phac8g02507 154 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Phac8g02507 154 PANTHER - 1 148 IPR044249 -
Phac8g02507 154 SMART ring_2 99 140 IPR001841 -
Phac8g02507 154 Pfam Ring finger domain 98 141 IPR001841 -
Phac8g02507 154 SUPERFAMILY RING/U-box 98 147 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phac8g02507 Phac-Chr8 34451518 34453968 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02507 1 148 C3H Transcription Factor Family AT2G04240 64.286 8.39e-61 183
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02507 K16285 - gmx:100786803 305.834