Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02495 ATGGGTGCTGTCGTAGAGTGTTACCCGCCGCCGCGCACGGCGGTGCTGTCTCTCAACACGCTGCCGCTAGGGTTCCGTTTCCGTCCCACCGATGAAGAGCTTATTGATTACTATCTGCGCTCGAAGATCAACGGAAACGGGGACGATGTTTGGGTTATCCGTGAAATTGATGTCTGCAAATGGGAGCCTTGGGATTTGCCTGATTTGTCGGTGGTACGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCGCAGGATCGGAAGTATCCCAATGGGCACAGGTTGAACCGAGCTACGAGCCTTGGGTATTGGAAAGCAACGGGGAAGGATCGAAGGATTAAGTCTGGTTCCACTTTGATTGGAATGAAGAAGACTCTTGTTTTCTATACTGGTCGTGCACCGAAGGGGAAGAGGACCAATTGGGTTATGCATGAGTACAGGCCTACCCTGAAGGAGCTCGATGGTACCAATCCTGGACAGAATCCGTATGTCCTTTGTCGCTTATTTAAGAAACATGATGAGAGTCTTGAAGCTTCAAATGGTGATGAGGTGGAACGGGCTGCTTCAACCCCTATGACTGCCAATCACTCTCCAGATGAAATACAATCTGATTCCTCTCTGGATCCAGCATCTTCCTCACAGATTACTGAAGGTGAAAAGCCTCTAACAGTTATCCCTGAGAACTCTGAAGAAGTAATATCCAACATTATAACTCCAGTTGACTCCCATAGTGATGGATGTGATGCTCGTGATGCACAAAATCAGATTGTAGAACTAGCTTCAGAGCAGGATCAGGCATTTAACTTTGAGGATTTTTATGACCCAACAAACCAGCAATTAGATGACAAATTATTCTCTCCAGTCCATGCTCATTTCCCACCAGAAATTTACTATCAATCAGAACTTCAGTATGGTACAAATGACAATATGCCCGACTTTTTTGACTCGGTTAATTGGGATGCGATCTCCTATGATACTAGCAGTCTAGAGCCATGCTCATCCCTCCTCAATGTTAAGGATCATGGATCAGGCAGTGACTCAGATGTGGAAATGGCCAATATGACGAATCCGCAGGCATTGCATGGTTATCCTAAGGAGGCAGTTGAGCAGAAGAGCAATGTAGGATTATTTCAGAACAGTCCCGAGATGGCTTTCTCAAACGATGGTTCTATGGGGGAAGTGGACTATTCGACCAAGAATTGTGGGCAACTAAGAAACTTTGATGCGTTTAATAATGGTGGTACTGGAATCAGAATAAGGTCTCGTCAAGGACGAACTGAACAGCCAAACATGAATGGAATGGTACCATCACAAGGTAATGCACCAAGGAGAATACGGTTGCATGTTGGGCGTGGGCGTCCATTTGGTTCCGAGGAGGCGGCAAAAGATGGAAGTTGTGCATGTGCCCCAGAAGACCATAATTCAAAAACCATCAATACTAGGGAGTGGAAAGCTTCAGACAACCATGCTGCCGACGAGAGTTCCGCCGTTGCTGATGATGTGGATGAACGAGAGAAGGAATCTCCGGAGTCATCTGACTTAGGAAAGATCACTCAGCAGCATGTTGCAACTGCAGAATCCATCTCAAAAGACCATCTACAGGTTTCGTCTAACCGTGGCATGTGGTCTTATGTTCTTGGAGTTTCTGCAACTGTGTTGGTTTCAGTAATACTCGTTGTTAATATATGGGCATATGTGAGATCTTAA 1707 0.4605 MGAVVECYPPPRTAVLSLNTLPLGFRFRPTDEELIDYYLRSKINGNGDDVWVIREIDVCKWEPWDLPDLSVVRNKDPEWFFFCPQDRKYPNGHRLNRATSLGYWKATGKDRRIKSGSTLIGMKKTLVFYTGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKHDESLEASNGDEVERAASTPMTANHSPDEIQSDSSLDPASSSQITEGEKPLTVIPENSEEVISNIITPVDSHSDGCDARDAQNQIVELASEQDQAFNFEDFYDPTNQQLDDKLFSPVHAHFPPEIYYQSELQYGTNDNMPDFFDSVNWDAISYDTSSLEPCSSLLNVKDHGSGSDSDVEMANMTNPQALHGYPKEAVEQKSNVGLFQNSPEMAFSNDGSMGEVDYSTKNCGQLRNFDAFNNGGTGIRIRSRQGRTEQPNMNGMVPSQGNAPRRIRLHVGRGRPFGSEEAAKDGSCACAPEDHNSKTINTREWKASDNHAADESSAVADDVDEREKESPESSDLGKITQQHVATAESISKDHLQVSSNRGMWSYVLGVSATVLVSVILVVNIWAYVRS* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02495 568 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 20 251 - -
Phac8g02495 568 ProSiteProfiles NAC domain profile. 21 171 IPR003441 GO:0003677|GO:0006355
Phac8g02495 568 MobiDBLite consensus disorder prediction 425 444 - -
Phac8g02495 568 SUPERFAMILY NAC domain 14 171 IPR036093 GO:0003677|GO:0006355
Phac8g02495 568 MobiDBLite consensus disorder prediction 177 227 - -
Phac8g02495 568 Pfam No apical meristem (NAM) protein 22 147 IPR003441 GO:0003677|GO:0006355
Phac8g02495 568 MobiDBLite consensus disorder prediction 484 512 - -
Phac8g02495 568 Gene3D NAC domain 30 175 IPR036093 GO:0003677|GO:0006355
Phac8g02495 568 MobiDBLite consensus disorder prediction 190 219 - -
Phac8g02495 568 MobiDBLite consensus disorder prediction 484 518 - -
Phac8g02495 568 FunFam Nac domain-containing protein 86 30 174 - -
Phac8g02495 568 MobiDBLite consensus disorder prediction 454 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02495 Phac-Chr8 34280874 34284983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02495 14 449 NAC Transcription Factor Family AT4G35580 41.866 1.26e-95 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac8g02495 NAM 5.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02495 - - gmx:100778903 889.797