Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02441 ATGGAAGCATATCCAAACGCGGCCTCCATGCTGAGAAACAGAACTATAATACCTCCTCCTCCACCGTTACTCGCTCTCAGCGCAAGGCTTCCGTCACCGTCAGCCTCGTCACCGTCACCGTCACCGTTACTGTCACCCTCCGTTACCCTCTTGAAACCCACACTATCGTGTTCTGGAACCCCGAAACCCTCGCTCCACCGTTTTTCTCTCTTCTCCCATTCTCACACTCTTCAAACCATGACGCTCTCCAAGTGCTTCTCTCACACTGGGCCCACCGTCCCCATTCCGGAGCCACCAGGATCCGAACCCCAACCCGATTCACCTCTCGTGGTGGTTTCCTTCTACAAATTTGCGGATTTTCCCGATCATACTCTCATGCGAAACCCCTTGAAGCAACTCTGCCAACGCCTGCGTGTTTCAGGTGGAATTATTCTTGCGCCTGAAGGGATCAATGGCAGCATATGTGGGACTCGGGAGTCAGTGGAGGACGTTCTGGCATTTGTGGAAGGCAATGATCGATTGAAGGGGCTAAGGCGAGTGGAATCACCTGTCAGTCCTGAGGAGGAGGCCATCCATCATGGGCATAGTGCTGCTTCTCCTCTTGCTGCTGGGGAAGATGCGCCCTTCCGATGGGATCATGTGAGGGTCAAGCTGAAGAAAGAGATTGTTACTCTTGGGATGCCTACTGTGTCGCCTATTGAAAGGGTTGGAAAGTATGTTGGCCCAGGAGAGTGGAATGCTTTGATCAATGATCCAGATACAGTGGTTATTGATGTGCGTAATAACTATGAAACCAGAATTGGAAAGTTTAAAGGAGCAGTTGATCCATGTACTACATCATTTCGTGAATTCCCGTCTTGGGTAGAGGAGCATTTCCAGCTTAGCGAAACAGATGATGGTGAGCATCCAAAAGTTGAGGTGAACAATTCAGTCCAACCTGCTGAAAAAGAAATGGAGAATCAAAAACAACATATGCCACGTGTTGCAATGTATTGCACTGGAGGTATTCGTTGTGAGAAAGCTACAAGTCTACTTCTCAGCAAAGGTTTCAAAGAGGTTTATCACCTGGAAGGTGGAATTCTAAAATATCTTGAAGAGGTTCCAGAGACAGAGAGCCTCTGGGAAGGGGAGTGCTTTGTTTTCGACAAACGCGTCTCTGTGGAGCATGGCCTGGTGCCAGGAAAATTCAAACTCTGCTATGGTTGTAAGCAGCCCGTGAGTGATGCTGACATGGAGGCCCCAGAGTTTGAATATGGAGTTTCCTGTCCTCACTGTTTTGCACAGAAATCTGATGAAGAGAAGGAGAGAGCTCGTGCTCGACAAACACAATTTGAGAGATGGGGAATCATAGGTGGTCCAGACAAGGGTCGCCGCCCAACTACTCAAGAACCGGAAAGTGCTAGCAGGAATCCAAACCAGCTTTCACGTTCTATTTAA 1437 0.4899 MEAYPNAASMLRNRTIIPPPPPLLALSARLPSPSASSPSPSPLLSPSVTLLKPTLSCSGTPKPSLHRFSLFSHSHTLQTMTLSKCFSHTGPTVPIPEPPGSEPQPDSPLVVVSFYKFADFPDHTLMRNPLKQLCQRLRVSGGIILAPEGINGSICGTRESVEDVLAFVEGNDRLKGLRRVESPVSPEEEAIHHGHSAASPLAAGEDAPFRWDHVRVKLKKEIVTLGMPTVSPIERVGKYVGPGEWNALINDPDTVVIDVRNNYETRIGKFKGAVDPCTTSFREFPSWVEEHFQLSETDDGEHPKVEVNNSVQPAEKEMENQKQHMPRVAMYCTGGIRCEKATSLLLSKGFKEVYHLEGGILKYLEEVPETESLWEGECFVFDKRVSVEHGLVPGKFKLCYGCKQPVSDADMEAPEFEYGVSCPHCFAQKSDEEKERARARQTQFERWGIIGGPDKGRRPTTQEPESASRNPNQLSRSI* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02441 478 SMART rhod_4 240 369 IPR001763 -
Phac8g02441 478 Hamap tRNA uridine(34) hydroxylase [trhO]. 107 409 IPR020936 -
Phac8g02441 478 MobiDBLite consensus disorder prediction 463 478 - -
Phac8g02441 478 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 219 398 IPR036873 -
Phac8g02441 478 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 104 441 IPR020936 -
Phac8g02441 478 Pfam Rhodanese-like domain 246 365 IPR001763 -
Phac8g02441 478 Pfam UPF0176 acylphosphatase like domain 110 222 IPR040503 -
Phac8g02441 478 MobiDBLite consensus disorder prediction 433 478 - -
Phac8g02441 478 Gene3D - 101 223 - -
Phac8g02441 478 Gene3D - 224 405 IPR036873 -
Phac8g02441 478 ProSiteProfiles Rhodanese domain profile. 250 372 IPR001763 -
Phac8g02441 478 CDD RHOD_YceA 237 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02441 Phac-Chr8 33907568 33912396 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02441 109 478 Sulfurtransferasese or Rhodanese AT2G40760 74.731 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02441 - - gmx:100784854 760.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g02441 8 33907568 33912396 Phac8g02441 8 33907568 33912396 ECH