Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02438 ATGAAAATGAACCTTTGTCCTGAAACTGAAAGTGCCTCACCCCAGAAGATGAGAGCAATAATGGAAGAGCTTGTTAAGGCCAAGGTGCTCACATCTTTCACACACGCTCTTTCTGCTATCAAATCTTCTCCTTTGCTACCTGGTTCTGCAGATGGGCTGGCTTATCAGAATCCCCTGTTTTCCGGCGAAGATGGGTGCTCTGTGCCCCGTTCCAGCAACTGTCCAACATCTGGAGATTGCAGTGAGAAGAGATCGCAAAAGGGTGGTAGAGGTCGCTACAGTAGAAGTACTGATGACAATCATGCATGGAGGAAGTATGGACAAAAGGAAATCGGGAATTCTCAATTCCCTAGTGGAATGGGATGTGTACATAGGGCCACCGTATCTCTGAACAGCCTTGCGAGACAAGACCAGCCATTGAGTTATTACTTACCAAGATTCATACCTTCTACTATCCCAGCTGCTATTGGGAATATGCTTGGGACGGCAATGGCTGCACATGTGGCAAACCGAAAGGCTGAGTTAGAGGTGAATATGCTTGTTCGGGACCCTCAAGTTTGCTTGTCTATCAATGAGAACCATTTTAATTGTAAGTACTTTCCAGACCATAGGCTGCCAGAAAATGTAGTTGCCACGACTGATGCCAAATCTGCTTTGCTTGGTTCTGATTACTGCCTCCATGCTGTACCTGTTCAGAGTATGTTGATCCAGGCTTGCCATTCATTTCTCTTGAGTAAAGGCCTAGAGCTGAATACACTGAGCATGATGGTTCAAATTATTCCTCAAGCACTACGAAATTCTCGCCAGCCTTTTGTTGCACTATCAGGGCCTTCTTTTGCTCTGGAATTGATGGATAAGCTACCCACAGGAGTTGAAATAGCTGGTGCACTCAAGAATGTGCATGCAATAGCCGCTGGGATAGTAGAAGGATTGAATATGTCATTAGATATTTATGAGTATCCAATGGGAGATAACATGATAAACCGAACTAACCTTAGATTCCAATACTCCAACAAAACTGACGTGTGTTCTGCTTGTCTTGTTTCTCTTCCCTCAAATTGTTTCTTGAAGATGGGTGCAAAGCCTACTACAATAACTGGTCTGTCAGGAACTGGAGACATAATACTTACATGTTTAGTGAATCTTTCAAGAAACAGAACAGTTGGTGTGCGGCTTGGATCAGGTGAGAAGCTTGAGAACATACTCAGTTCCATGAATCAGGTAGCAGAAGGTGTCTCCACAGCCGGAGCTGTGATTGCTTTGGCGCAGAAATATAATGTAAAGATGCCAGTCTTGACAGCAGTTGCTCGTATTATTGATAATGAACTTACTCCTAAGAAAGCTGTTTTTGAGTTAATGAGCCTCCCTCAGGTTGAAGAAGTATGA 1386 0.4394 MKMNLCPETESASPQKMRAIMEELVKAKVLTSFTHALSAIKSSPLLPGSADGLAYQNPLFSGEDGCSVPRSSNCPTSGDCSEKRSQKGGRGRYSRSTDDNHAWRKYGQKEIGNSQFPSGMGCVHRATVSLNSLARQDQPLSYYLPRFIPSTIPAAIGNMLGTAMAAHVANRKAELEVNMLVRDPQVCLSINENHFNCKYFPDHRLPENVVATTDAKSALLGSDYCLHAVPVQSMLIQACHSFLLSKGLELNTLSMMVQIIPQALRNSRQPFVALSGPSFALELMDKLPTGVEIAGALKNVHAIAAGIVEGLNMSLDIYEYPMGDNMINRTNLRFQYSNKTDVCSACLVSLPSNCFLKMGAKPTTITGLSGTGDIILTCLVNLSRNRTVGVRLGSGEKLENILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIIDNELTPKKAVFELMSLPQVEEV* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02438 461 Gene3D WRKY domain 82 143 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g02438 461 SUPERFAMILY WRKY DNA-binding domain 96 128 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g02438 461 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 289 460 IPR008927 -
Phac8g02438 461 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 159 297 IPR036291 -
Phac8g02438 461 MobiDBLite consensus disorder prediction 66 82 - -
Phac8g02438 461 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 357 460 - -
Phac8g02438 461 Gene3D - 296 461 IPR013328 GO:0016491
Phac8g02438 461 Pfam WRKY DNA -binding domain 98 118 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g02438 461 MobiDBLite consensus disorder prediction 83 101 - -
Phac8g02438 461 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 289 449 IPR006109 GO:0005975|GO:0047952
Phac8g02438 461 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 160 295 IPR011128 GO:0016616|GO:0046168|GO:0051287
Phac8g02438 461 MobiDBLite consensus disorder prediction 66 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02438 Phac-Chr8 33857872 33865992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02438 157 461 Acyl Lipid Metabolism Gene Families AT2G40690 62.644 2.77e-133 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac8g02438 NAD_Gly3P_dh_C 1.1e-34 CL0106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02438 K00006 - gmx:100775580 408.297