Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02430 ATGTGGGATCTCAATGACCCTCCTGATCAGTGGAAGAGCTATGAATATGAAGGTTGCTCTTCTTCGCTGAATCATGATAAAGGCGAGAGAGTGGGAAGCTCCTCTCCCGTGGTCCTCCAAGATGGATTGGAAGAAAAAGACAGTGACAAGGCTGGAAGCAGAGAATTGGAGAAAAAAAGCATTAAAATATTCGGCTTTTCAGTTACACACGATGACAGTGACCAACCACTTGTCACCCGACAACAAAGAAGCCATTCAAAAGGCATCTCAAGAATGTGGGATCTGAATGACTCTCCCGATCAGAGTAAGAACTATGAATATGAAGATTGCTCTTCTTCGCTGAATGATGATAAAGGCAAGAGAGTGGGGTCTGTTTCAAATTCAAGCTCCTCTCCCGTAGTCCTCGAAAATGGATTGGAAGAAGAAGACAGGGACAAAGGTGGAAGCAGAACATTGGAGAAAAAAACCGTTCAAATATTCGGCTTTTCAGTTACACACCATCACACTGACCACCCACCCATCACCCGCCAGTTTTTTCCGGTCGAGGATTCCGACCTTCCTGTCTCCGAAGCCGGCGGCGGCCGAAGCTCTTCCTTCCCTCGTGCTCACTGGGTAGGCGCCAAATTTTGTCAATCGGAAACTCTCGGCACCGGTAAATCAGTGAAAGTGAGGGAGAAGATGAAGAAAAGTCGGCGAGCACCACCATCGCGAAGCTCACAGTATCGCGGAGTTACCTTTTACAGAAGAACCGGTCGATGGCGGTCTCATATATGGGATTGTGGAAAGCAAGTGTATTTGGGTGGATTTGACTCAGCACATGCAGCTGCTCGTGCGTATGATAGAGTGGCCATTAAGTTCCAGGGGGTGGACGCAGATATCAACTTCAACATAGAAGACTATGAAGAAGACTTGAAGAAGATGATGAATTTAACCAGGGAAGAGTTTGTGCACCTACTTCGCCGACAAAGCACTGGATTTTCGAGAGGAAGCTCCAAATATAGAGGTGTAACTTTGCACAAGTGTGGAAGATGGGAGGCTCAAATGGGCCAATTTTTGGGCAAAAAGTACGTTTATCTGGGTCTGTTTGACACCGAGATTGAAGCTGCAAGGGCACATTTTGCAAAAATATGCATTGGCGAAGAGGCCGTCACAAATTTTGATCCAGCATCTATGATAAATGTTGTCGACGAAAGGTGA 1197 0.4637 MWDLNDPPDQWKSYEYEGCSSSLNHDKGERVGSSSPVVLQDGLEEKDSDKAGSRELEKKSIKIFGFSVTHDDSDQPLVTRQQRSHSKGISRMWDLNDSPDQSKNYEYEDCSSSLNDDKGKRVGSVSNSSSSPVVLENGLEEEDRDKGGSRTLEKKTVQIFGFSVTHHHTDHPPITRQFFPVEDSDLPVSEAGGGRSSSFPRAHWVGAKFCQSETLGTGKSVKVREKMKKSRRAPPSRSSQYRGVTFYRRTGRWRSHIWDCGKQVYLGGFDSAHAAARAYDRVAIKFQGVDADINFNIEDYEEDLKKMMNLTREEFVHLLRRQSTGFSRGSSKYRGVTLHKCGRWEAQMGQFLGKKYVYLGLFDTEIEAARAHFAKICIGEEAVTNFDPASMINVVDER* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02430 398 Pfam AP2 domain 331 372 IPR001471 GO:0003700|GO:0006355
Phac8g02430 398 Pfam AP2 domain 240 286 IPR001471 GO:0003700|GO:0006355
Phac8g02430 398 SUPERFAMILY DNA-binding domain 239 297 IPR016177 GO:0003677
Phac8g02430 398 CDD AP2 239 297 IPR001471 GO:0003700|GO:0006355
Phac8g02430 398 MobiDBLite consensus disorder prediction 70 151 - -
Phac8g02430 398 CDD AP2 331 389 IPR001471 GO:0003700|GO:0006355
Phac8g02430 398 MobiDBLite consensus disorder prediction 117 135 - -
Phac8g02430 398 SMART rav1_2 240 302 IPR001471 GO:0003700|GO:0006355
Phac8g02430 398 SMART rav1_2 332 393 IPR001471 GO:0003700|GO:0006355
Phac8g02430 398 MobiDBLite consensus disorder prediction 72 109 - -
Phac8g02430 398 MobiDBLite consensus disorder prediction 137 151 - -
Phac8g02430 398 ProSiteProfiles AP2/ERF domain profile. 240 296 IPR001471 GO:0003700|GO:0006355
Phac8g02430 398 ProSiteProfiles AP2/ERF domain profile. 332 372 IPR001471 GO:0003700|GO:0006355
Phac8g02430 398 Gene3D AP2/ERF domain 331 388 IPR036955 GO:0003700|GO:0006355
Phac8g02430 398 Gene3D AP2/ERF domain 239 298 IPR036955 GO:0003700|GO:0006355
Phac8g02430 398 MobiDBLite consensus disorder prediction 1 55 - -
Phac8g02430 398 SUPERFAMILY DNA-binding domain 331 387 IPR016177 GO:0003677
Phac8g02430 398 FunFam AP2-like ethylene-responsive transcription factor 239 298 - -
Phac8g02430 398 Coils Coil 394 398 - -
Phac8g02430 398 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 168 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02430 Phac-Chr8 33811330 33817331 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02430 92 389 AP2-EREBP Transcription Factor Family AT4G36920 61.981 5.28e-105 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Phac8g02430 AP2 2e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02430 K09284 - gmx:100786333 469.159