Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02385 ATGGACCCACCTGCAATGTACGGACACTCCCAGCCCCTGAACATGCCTCCGCAGATCTCCGCCGCCGAAAGCGACGATGGCTCCGGCCCCGACCCCGCCCTCGACGCCCACCACCACATTCACTACGAAACTCACGCGCTCGAAGACGGTGCAACCGGTGCCATGGTCGTCGTTGAGGATGTCACTTCGGATGCGGTCTATGTCTCCGGCGGTGGAGGGCCCGAAGAGTCTAGCCAGCTTACGCTGTCGTTTCGTGGCCAAGTTTACGTCTTCGATGCCGTTACGCCTGATAAGGTTCAAGCGGTGTTGTTACTGTTGGGTGGATGTGAACTCTCTTCTAGTGGTTCGCCATGTGTGGATGTGGTGCCTCAACAGAATCAGAGGGGTTCAATGGAATATCCTGCAAGATGTAGTCTACCACAGCGAGCTGCCTCGTTAGATAGGTTCAGGCAAAAGAGGAAAGAGCGATGCTTTGATAAAAAAGTGAGATATAGTGTACGGCAAGAAGTTGCTCTCAGGATGCACCGTAATAAGGGGCAATTCACTTCTTCTAAGAAACAAGATGGAGCTAATAGTTATGGTACAGATCAAGATTCAGGACAGGATGATAGTCAATCAGAAACCTCATGCACACATTGTGGCATTAGTTCAAAATCCACCCCAATGATGCGGCGGGGGCCGTCTGGTCCAAGGTCACTATGCAATGCTTGTGGGCTTTTTTGGGCAAACAGGGGTGCTTTGAGAGACCTTTCCAAGAGAAATCATGAACACTCTCTTGCACCAGTTGAGCAGGTTGATGAAGGTAACGACTCAGATTGTCGAACTGCCGCCAACCCTGCACATAACAATCTCGGTCACGCTGCATACTCAGAGCATGATCATCCTGCTTTGGTAGCTGATCGTAAAGTTTTCCAGTCCCAGAAAATGCTGGAGTAG 936 0.5118 MDPPAMYGHSQPLNMPPQISAAESDDGSGPDPALDAHHHIHYETHALEDGATGAMVVVEDVTSDAVYVSGGGGPEESSQLTLSFRGQVYVFDAVTPDKVQAVLLLLGGCELSSSGSPCVDVVPQQNQRGSMEYPARCSLPQRAASLDRFRQKRKERCFDKKVRYSVRQEVALRMHRNKGQFTSSKKQDGANSYGTDQDSGQDDSQSETSCTHCGISSKSTPMMRRGPSGPRSLCNACGLFWANRGALRDLSKRNHEHSLAPVEQVDEGNDSDCRTAANPAHNNLGHAAYSEHDHPALVADRKVFQSQKMLE* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02385 311 SMART GATA_3 204 257 IPR000679 GO:0006355|GO:0043565
Phac8g02385 311 ProSiteProfiles GATA-type zinc finger domain profile. 204 253 IPR000679 GO:0006355|GO:0043565
Phac8g02385 311 Gene3D - 200 259 IPR013088 GO:0006355|GO:0008270
Phac8g02385 311 ProSitePatterns GATA-type zinc finger domain. 210 237 IPR000679 GO:0006355|GO:0043565
Phac8g02385 311 ProSiteProfiles Tify domain profile. 73 108 IPR010399 -
Phac8g02385 311 Pfam tify domain 74 107 IPR010399 -
Phac8g02385 311 PANTHER GATA TRANSCRIPTION FACTOR 28 7 281 IPR045280 GO:0006355
Phac8g02385 311 Pfam CCT motif 142 184 IPR010402 GO:0005515
Phac8g02385 311 CDD ZnF_GATA 209 254 IPR000679 GO:0006355|GO:0043565
Phac8g02385 311 MobiDBLite consensus disorder prediction 1 36 - -
Phac8g02385 311 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 206 258 - -
Phac8g02385 311 MobiDBLite consensus disorder prediction 183 223 - -
Phac8g02385 311 ProSiteProfiles CCT domain profile. 142 184 IPR010402 GO:0005515
Phac8g02385 311 Pfam GATA zinc finger 210 245 IPR000679 GO:0006355|GO:0043565
Phac8g02385 311 MobiDBLite consensus disorder prediction 175 228 - -
Phac8g02385 311 SMART tify_2 73 108 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02385 Phac-Chr8 33247486 33252268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02385 74 299 Tify Gene Family AT4G24470 63.158 1.65e-94 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Phac8g02385 CCT 2.4e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02385 - - pvu:PHAVU_008G182900g 618.231