Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02365 ATGCTTCCCTTTCGGAGATTCTACGGGTTCCAGAGTTGGCTAGACCACGACTCTACCCACATCCCCAACTCGTTGATTAAAAGGGCAGTGGAGTTCGACGGCGCCAGATCAAAAACGGAGCGCAAATCAACGGAAGCATGCAAGAGTCACAGGGAAGCCGAGAGGAGACGCAGGCAGAGAATCAACTCCCACCTCTCCACCTTACGTTCCCTCCTTCCTAACGCCGCCAAGTCGGATAAAGCGTCGTTGCTGGCGGAAGTTGTCGAGCACGTGAAACGGTTAAGGAAGCAGGCCAATGACGTGGCGTGCGCGGACGGGGGCGAACCGGGTGCGGTTCGGTCTGAGGCGTGGCCGCTTCCCGGGGAGTGCGACGAGGCGACGGTGAGTTTGTGCGAGGGGGAGGCGCGGCGGGTGAAGGCGACGGTGTGCTGTGAGGACCGGGCCGGTCTGAACCGGGACGTGACACGGGCAATCCGGTCGGTTCGGGCAAAGCCGGTTCGAGCGGAAATGATGACGGTTGGGGGAAGGACGAAGAGTGTGGTGGTGGTGGAGTGGGGTGAAGAGGAGGTGGAGGGAAAGGAGGTTGGGGCGCTGGAACGGGCTTTGAAGGCCGTAGTAGAGAATCGGGCATTGGTGGGCTTTGGAATGGGCCCTGTTGTTTTGGGCCAGAAACGGGGTAGGGATTCTTGCGGTTCGCCTAGTTCTTGTTGA 711 0.6006 MLPFRRFYGFQSWLDHDSTHIPNSLIKRAVEFDGARSKTERKSTEACKSHREAERRRRQRINSHLSTLRSLLPNAAKSDKASLLAEVVEHVKRLRKQANDVACADGGEPGAVRSEAWPLPGECDEATVSLCEGEARRVKATVCCEDRAGLNRDVTRAIRSVRAKPVRAEMMTVGGRTKSVVVVEWGEEEVEGKEVGALERALKAVVENRALVGFGMGPVVLGQKRGRDSCGSPSSC* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02365 236 MobiDBLite consensus disorder prediction 37 56 - -
Phac8g02365 236 Pfam Helix-loop-helix DNA-binding domain 47 94 IPR011598 GO:0046983
Phac8g02365 236 Gene3D - 39 102 IPR036638 GO:0046983
Phac8g02365 236 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 100 IPR036638 GO:0046983
Phac8g02365 236 PANTHER TRANSCRIPTION FACTOR BHLH30 33 227 IPR045847 GO:0003700|GO:0006355
Phac8g02365 236 SMART finulus 51 100 IPR011598 GO:0046983
Phac8g02365 236 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 45 94 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02365 Phac-Chr8 32953573 32954925 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02365 32 207 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G25710 37.799 8.80e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac8g02365 HLH 8.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02365 - - gmx:100816394 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g02365 8 32953573 32954925 Phac8g02365 8 32953573 32954925 ECH