Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02357 ATGTTCTCAAAACTTCATCCGCAACACCAACCTTTTCAATTCTCCCGAGAATGTCAAACATCCGAGGACGATGACAGCCGGAGTAGCGGTGGACCCAACCTCGCGGCACAGAAGCCCGTCTCCACAGGCGATGGAGCTACAATTGAGGTAGTGCGGCGGCCCAGGGGCCGCCCTCCCGGCTCCAAAAACAAGCCCAAGCCGCCTCTTATTATTACCCGCGAGCCCGACCCCGCCATGAGCCCCTTCATTTTAGAAATCCCTGGCGGGAAAGACGTCGTCGATGCCCTAGCCCAGTTCAGCCGCAGAAAGAACACGGGCCTCTGTGTCCTCACCGGTTCGGGAACCGTTGGTAACGTCACTCTCCGCCAACCCTCCGTTGCTGCCGTCGGCACCGTTACCTTCCACGGCCGCTTCGACATCCTCTCCATGTCCGCCACCTTCCTCCTCCACGCCCCCCCGCCGCCGGCCCCTCCCTCCACCTTCACCGTCTCGCTAGCCGGACCACAGGGGCAGATCGTCGGCGGACACGTCGCTGGAAGGCTGCTCGCTGCTGGGACGGTCTTCATCATCGCCGCGTCGTTCAACAACCCCTCCTTCCACCGGCTGTCGTCGGAGGACGACGCGCAGAATAACTGCGCGTCCGGCGGAGGCGGCGGCAGAGATGCGCAGTCGCCGCTTGCCTCAGGTGGTGGCGCGGAGAGCGGACAACTTCCGGCGGAGTCGTGTATGTACAGCTGTCACCTCCCTTCGGATGTGATTTGGGCTCCAACGGCTAGACCACCTTTCTGA 789 0.6248 MFSKLHPQHQPFQFSRECQTSEDDDSRSSGGPNLAAQKPVSTGDGATIEVVRRPRGRPPGSKNKPKPPLIITREPDPAMSPFILEIPGGKDVVDALAQFSRRKNTGLCVLTGSGTVGNVTLRQPSVAAVGTVTFHGRFDILSMSATFLLHAPPPPAPPSTFTVSLAGPQGQIVGGHVAGRLLAAGTVFIIAASFNNPSFHRLSSEDDAQNNCASGGGGGRDAQSPLASGGGAESGQLPAESCMYSCHLPSDVIWAPTARPPF* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02357 262 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 22 228 IPR014476 GO:0003680
Phac8g02357 262 ProSiteProfiles PPC domain profile profile. 76 215 IPR005175 -
Phac8g02357 262 MobiDBLite consensus disorder prediction 205 234 - -
Phac8g02357 262 FunFam AT-hook motif nuclear-localized protein 80 213 - -
Phac8g02357 262 MobiDBLite consensus disorder prediction 1 17 - -
Phac8g02357 262 Pfam Plants and Prokaryotes Conserved (PCC) domain 81 196 IPR005175 -
Phac8g02357 262 Gene3D - 80 212 - -
Phac8g02357 262 MobiDBLite consensus disorder prediction 1 76 - -
Phac8g02357 262 CDD DUF296 81 194 IPR005175 -
Phac8g02357 262 PIRSF ESCAROLA 2 253 IPR014476 GO:0003680
Phac8g02357 262 SUPERFAMILY AF0104/ALDC/Ptd012-like 78 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02357 Phac-Chr8 32889819 32891419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02357 42 261 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 64.530 7.90e-96 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02357 - - gmx:100811053 394.43