Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02353 ATGGACTCTGCCACAAACGCTCCGCAAGGAAATCCAACAAAATTAAAGAAGGGGTTTATCGCTCCAGAAATTGCCTACACCCTCTTCGTCATCTTCGGCATCATCTTCTTCATAGGATTTTTATATATGTACTTCCGAAGGCACTCCTCCTCGTCCGATCAAGAGGCCGGCGACATCCACGGGAAACCGGTGTCGAGACCTCTGACGGTGGTGACGGTGGTGGCGGAGACGGCTGGGGAGTGCACAATATGTTTGGAGGAGGTGGGAGAAGGAGAGACGGTGAAGATGGTTGCCTACTGCCATCATATATTCCACGCGGATTGCATTGAGAGATGGCTGGAGAACCAAGTCACGTGCCCCGTGTGCCGGTACTCTGAGGGAAGTGAAGAGGTGGAGTTGTGA 402 0.5249 MDSATNAPQGNPTKLKKGFIAPEIAYTLFVIFGIIFFIGFLYMYFRRHSSSSDQEAGDIHGKPVSRPLTVVTVVAETAGECTICLEEVGEGETVKMVAYCHHIFHADCIERWLENQVTCPVCRYSEGSEEVEL* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02353 133 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 128 IPR013083 -
Phac8g02353 133 SUPERFAMILY RING/U-box 80 125 - -
Phac8g02353 133 ProSiteProfiles Zinc finger RING-type profile. 81 123 IPR001841 -
Phac8g02353 133 SMART ring_2 81 122 IPR001841 -
Phac8g02353 133 PANTHER RING FINGER DOMAIN-CONTAINING 18 123 - -
Phac8g02353 133 Pfam Ring finger domain 80 123 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02353 Phac-Chr8 32650427 32650994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02353 2 123 Rapid Response to Elicitors AT3G05200 32.192 2.41e-18 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02353 - K10664 var:108339852 130.183