Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02338 ATGGCACCCAGTTTTGATTGCTTTTCGAGTCTTCTCTGTGCGGAAGATAATATTATTTTTGACGAAAATGATCGCGGAGGTTTGGTGGAGGAGTTGGAGGACACTTGGGAGAATCCTATATATGATCGAAATCATAGTCAAATTGAGAACTTGGATGTCCAATATGTGTCGTTTCCATTGCCGAGTGACGAGTGTTTGAGACTAATGATGGAAACAGAATTGCATCACTTGCCTAATGGTGATTATGTGAGTAGGCTGAGGAGTGGGGATTTGGACATTGGGGCCAGAAAAGAGGCCATTGATTGGATTGAAAAGGTCCGTGAGCACTTTGGTTTTGGACCTCTCTGTGCATATCTATCTATAAATTACTTGGACCGCTTCCTCTCTGTTTATGAATTACCACAACGAGCTTGGACAATGAAATTGCTGGCTGTAGGTTGCGTATCTTTGGCAGCCAAAATGGAAGAGACTGATGTTCCTACATCTCTTGATTTGCAGGTGGGTGAATCTAAGTATGTATTTGAAGCCAAAACAATACAGAGGATGGAGCTTCTGGTTCTGAACACATTGAAGTGGAGAATGCAGGCAATTACCCCATTTTCCTTCATTGACTATTTCCTTCAGAAGATCAATGATGATCAAGCACCAATTGGAGCTTCAATTTTGCAATCCTCCGAGCTTATACTGAGTACTGTAAGAGGAATTGACTTCATTGAGTTCAGACCCTCAGAGATTGCAGCAGCAGTGGCAATATCTGTGGTGGGGGAGGGCCAAACAGTTCATACAGAGAAAGCAAATTCTGATCTGATTCAGCCTGTAGGAAAGGAGAGGGTCTTGAAGTGTGTTAAAATGATCCAAGAGCTGTCATCAGACAGTGGTTCTGCTAAGGATGCCATTCCTTCTGTTTCTGTCCCTAGCGTGCCTGAAAGCCCAATAAGGGTGTTGAACAATGCATGCTTCAGCTACAAAAGTGATGACCCAAATGCTGCTCCTTGTGCAAATTCTTCACATAATGATAGTCCAGATGCTAAAAGGAGGAAGCTAGACAAAACCTTTGGAGAATAG 1065 0.4291 MAPSFDCFSSLLCAEDNIIFDENDRGGLVEELEDTWENPIYDRNHSQIENLDVQYVSFPLPSDECLRLMMETELHHLPNGDYVSRLRSGDLDIGARKEAIDWIEKVREHFGFGPLCAYLSINYLDRFLSVYELPQRAWTMKLLAVGCVSLAAKMEETDVPTSLDLQVGESKYVFEAKTIQRMELLVLNTLKWRMQAITPFSFIDYFLQKINDDQAPIGASILQSSELILSTVRGIDFIEFRPSEIAAAVAISVVGEGQTVHTEKANSDLIQPVGKERVLKCVKMIQELSSDSGSAKDAIPSVSVPSVPESPIRVLNNACFSYKSDDPNAAPCANSSHNDSPDAKRRKLDKTFGE* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02338 354 MobiDBLite consensus disorder prediction 329 354 - -
Phac8g02338 354 SMART cyclin_7 101 188 IPR013763 -
Phac8g02338 354 CDD CYCLIN_AtCycD-like_rpt2 197 285 - -
Phac8g02338 354 CDD CYCLIN_AtCycD-like_rpt1 95 192 - -
Phac8g02338 354 FunFam D6-type cyclin 191 283 - -
Phac8g02338 354 PANTHER CYCLINS 68 289 IPR039361 -
Phac8g02338 354 Pfam Cyclin, C-terminal domain 197 296 IPR004367 -
Phac8g02338 354 SMART Cyclin_C_2 197 312 IPR004367 -
Phac8g02338 354 Gene3D - 67 282 - -
Phac8g02338 354 SUPERFAMILY Cyclin-like 58 194 IPR036915 -
Phac8g02338 354 ProSitePatterns Cyclins signature. 96 127 IPR006671 -
Phac8g02338 354 MobiDBLite consensus disorder prediction 339 354 - -
Phac8g02338 354 SUPERFAMILY Cyclin-like 179 285 IPR036915 -
Phac8g02338 354 Pfam Cyclin, N-terminal domain 66 194 IPR006671 -
Phac8g02338 354 Gene3D - 79 195 - -
Phac8g02338 354 FunFam D2/4-type cyclin 79 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02338 Phac-Chr8 32454897 32457841 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02338 10 266 Core Cell Cycle Gene Families AT5G65420 51.923 1.92e-81 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02338 K18810 - gmx:100803873 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g02338 8 32454897 32457841 Phac8g02338 8 32454897 32457841 ECH