Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02337 ATGGCACCCAGTTTTGATTGCTTTTCGAGTCTTCTCTGTGCGGAAGATAATATTATTTTTGACGAAAATGATCGCGGAGGTTTGGTGGAGGAGTTGGAGGACACTTGGGAGAATCCTATATATGATCGAAATCATAGTCAAATTGAGAACTTGGATGTCCAATATGTGTCGTTTCCATTGCCGAGTGACGAGTGTTTGAGACTAATGATGGAAACAGAATTGCATCACTTGCCTAATGGTGATTATGTGAGTAGGCTGAGGAGTGGGGATTTGGACATTGGGGCCAGAAAAGAGGCCATTGATTGGATTGAAAAGGTCCGTGAGCACTTTGGTTTTGGACCTCTCTGTGCATATCTATCTATAAATTACTTGGACCGCTTCCTCTCTGTTTATGAATTACCAAAGCAACGAGCTTGGACAATGAAATTGCTGGCTGTAGGTTGCGTATCTTTGGCAGCCAAAATGGAAGAGACTGATGTTCCTACATCTCTTGATTTGCAGGTGGGTGAATCTAAGTATGTATTTGAAGCCAAAACAATACAGAGGATGGAGCTTCTGGTTCTGAACACATTGAAGTGGAGAATGCAGGCAATTACCCCATTTTCCTTCATTGACTATTTCCTTCAGAAGATCAATGATGATCAAGCACCAATTGGAGCTTCAATTTTGCAATCCTCCGAGCTTATACTGAGTACTGTAAGAGGAATTGACTTCATTGAGTTCAGACCCTCAGAGATTGCAGCAGCAGTGGCAATATCTGTGGTGGGGGAGGGCCAAACAGTTCATACAGAGAAAGCAAATTCTGATCTGATTCAGCCTGTAGGAAAGGAGAGGGTCTTGAAGTGTGTTAAAATGATCCAAGAGCTGTCATCAGACAGTGGTTCTGCTAAGGATGCCATTCCTTCTGTTTCTGTCCCTAGCGTGCCTGAAAGCCCAATAAGGGTGTTGAACAATGCATGCTTCAGCTACAAAAGTGATGACCCAAATGCTGCTCCTTGTGCAAATTCTTCACATAATGATAGTCCAGATGCTAAAAGGAGGAAGCTAGACAAAACCTTTGGAGAATAG 1068 0.4288 MAPSFDCFSSLLCAEDNIIFDENDRGGLVEELEDTWENPIYDRNHSQIENLDVQYVSFPLPSDECLRLMMETELHHLPNGDYVSRLRSGDLDIGARKEAIDWIEKVREHFGFGPLCAYLSINYLDRFLSVYELPKQRAWTMKLLAVGCVSLAAKMEETDVPTSLDLQVGESKYVFEAKTIQRMELLVLNTLKWRMQAITPFSFIDYFLQKINDDQAPIGASILQSSELILSTVRGIDFIEFRPSEIAAAVAISVVGEGQTVHTEKANSDLIQPVGKERVLKCVKMIQELSSDSGSAKDAIPSVSVPSVPESPIRVLNNACFSYKSDDPNAAPCANSSHNDSPDAKRRKLDKTFGE* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02337 355 Pfam Cyclin, C-terminal domain 198 297 IPR004367 -
Phac8g02337 355 SMART Cyclin_C_2 198 313 IPR004367 -
Phac8g02337 355 Gene3D - 79 196 - -
Phac8g02337 355 MobiDBLite consensus disorder prediction 330 355 - -
Phac8g02337 355 Gene3D - 67 283 - -
Phac8g02337 355 SMART cyclin_7 101 189 IPR013763 -
Phac8g02337 355 Pfam Cyclin, N-terminal domain 66 195 IPR006671 -
Phac8g02337 355 CDD CYCLIN_AtCycD-like_rpt1 95 193 - -
Phac8g02337 355 PANTHER CYCLINS 68 290 IPR039361 -
Phac8g02337 355 FunFam D2/4-type cyclin 79 191 - -
Phac8g02337 355 ProSitePatterns Cyclins signature. 96 127 IPR006671 -
Phac8g02337 355 SUPERFAMILY Cyclin-like 180 286 IPR036915 -
Phac8g02337 355 SUPERFAMILY Cyclin-like 58 195 IPR036915 -
Phac8g02337 355 FunFam D6-type cyclin 192 284 - -
Phac8g02337 355 CDD CYCLIN_AtCycD-like_rpt2 198 286 - -
Phac8g02337 355 MobiDBLite consensus disorder prediction 340 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02337 Phac-Chr8 32454897 32457841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02337 10 267 Core Cell Cycle Gene Families AT5G65420 51.923 6.52e-83 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02337 K18810 - gmx:100803873 558.91