Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02336 ATGGATGATGCTGACCGTGATTACAGTTACGAGGAGTCTGACAGTGATGAAGATGATGATGAAGAAACCCCTCCTCCTAAAAAGGCGAATTTAGGAAAGAAGAGATCAAATGAGTCTGCATCAAAAACTCTTGTTTCCTCTAAGAAAGCAAAAAATGCTACTCCAGAAAAGACTGATGATAAGAGAACAGGAAATGCAGGAACTCCACACTCCACGAAGAAAGGTGGAAAGACTCCCAACAATGAAGGCAAGAGTCTCAAGTCTGGTGGACTCAGTTGCAAAAGCTGCAGCAAGTCTTTCAACTCCGACAGTGGTCTGCAACAACATAACAAGGCAAAGCACGGTGGCTAG 351 0.4387 MDDADRDYSYEESDSDEDDDEETPPPKKANLGKKRSNESASKTLVSSKKAKNATPEKTDDKRTGNAGTPHSTKKGGKTPNNEGKSLKSGGLSCKSCSKSFNSDSGLQQHNKAKHGG* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02336 116 MobiDBLite consensus disorder prediction 1 21 - -
Phac8g02336 116 MobiDBLite consensus disorder prediction 1 116 - -
Phac8g02336 116 SUPERFAMILY beta-beta-alpha zinc fingers 91 115 IPR036236 -
Phac8g02336 116 MobiDBLite consensus disorder prediction 36 51 - -
Phac8g02336 116 ProSitePatterns Zinc finger C2H2 type domain signature. 93 114 IPR013087 -
Phac8g02336 116 MobiDBLite consensus disorder prediction 52 67 - -
Phac8g02336 116 ProSiteProfiles Zinc finger C2H2 type domain profile. 91 116 IPR013087 -
Phac8g02336 116 MobiDBLite consensus disorder prediction 68 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02336 Phac-Chr8 32388114 32388464 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02336 35 114 C2H2 Transcription Factor Family AT5G03740 41.758 3.55e-12 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac8g02336 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02336 - - gmx:100795506 145.976