Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02333 ATGCTCTACCTCACTTGCAACGCCGACACCGCAATAGCCATATGCCACCCTCACTCCCTCAAGAAGAACAAAAAGCCCATAAGCCCAACACAGGCCCACACCCTGCCACTCTTCGCCTACTCCGACATCCTCGCCGCCACCAACGCCTTCTCCGCTGACACCTTCCTAGGCAAAGGAAGCCACGGCAGCGTCTACAAAGCCACCCTGCACGGCGGCACGTTCATCGCCGCCGTCAAAAAAACCAAACCCTCCAACGAGATCGAAATCCTCTCCCACGTCAAAAGCCGGCGCTTGGTCAACCTAATTGGCCTCTGCAACGACCAAACTAACTGCAACATTAACAAACTCATTGTCGTGGAGTACATGCCCAACGGTTCGCTCCACGACCTTCTCCACTCCCCCAAAACAGTTGGAACCCCCAGTTGGACCGCGCGTGTTCGGTTCGCGGTTCACGTCGCGAAAGCGGTTCGCTTGTTGCACTCGTCCGAACCGCCCGTTATTCACCGTGATATTAAATCGTCCAACGTGTTAATCGATGAGAAGTGGAAGGCGCGACTCGGTGACTTCGGACTCGCTTTTAGAGGACACGTGGCGGATTCTCGCGTGCCGCCAGCGGGGACGTTAGGGTACCTCGACCCCTGCTATCTTGCGCCGGGGGACTTGAGTCCCAAGAGTGATGTCTTCAGTTTTGGAATTTTGCTGCTGGAGATAGCGAGTGGGAGGCACGCGATTGATGTGAGGCACAGTCCGCCGTCGTTGTTGGATTGGGCGATGCCGTTGGTCTGCCGTGGGGAGTTTCGGGAGATTTGCGACCCGCGAATCGGAGCGCCACCGGACATGGCAGCGTTCCGGAGGATGATGGTGCTGGCAGCGAGGTGCGTTAGGTCAACTGCGGAGAGACGGCCGACGATTGCGGAGGTGGTGGAGTGTCTGACGGCGGCGAGGAAGAATTTTGAGGCGCCGGTGATGTGGTCGAGAATGACAGGGCGTGTGGTGAAGGCGCGTGGCTATCCCTTCCCTGATTGGGACAGGAGTGAGGAATCTGTGAGAAGAGTTTTAGGTGGAAGTAGAAACAGTAGAAGGAATGGGAAGGTATCTAGTGTGTTGGGTGTAGAGTGTGGGAGTGGACCCGCGAAACATGCAGTTAGGTCTAGATCCGTTGGTTCTGGTTTTTTGGGAGAAATGAAAATAAAGTCGGTTTTGGAACGGTACCCTAACCAACAATTTGGGTCTGCGGGGCTTTTGTGA 1248 0.5577 MLYLTCNADTAIAICHPHSLKKNKKPISPTQAHTLPLFAYSDILAATNAFSADTFLGKGSHGSVYKATLHGGTFIAAVKKTKPSNEIEILSHVKSRRLVNLIGLCNDQTNCNINKLIVVEYMPNGSLHDLLHSPKTVGTPSWTARVRFAVHVAKAVRLLHSSEPPVIHRDIKSSNVLIDEKWKARLGDFGLAFRGHVADSRVPPAGTLGYLDPCYLAPGDLSPKSDVFSFGILLLEIASGRHAIDVRHSPPSLLDWAMPLVCRGEFREICDPRIGAPPDMAAFRRMMVLAARCVRSTAERRPTIAEVVECLTAARKNFEAPVMWSRMTGRVVKARGYPFPDWDRSEESVRRVLGGSRNSRRNGKVSSVLGVECGSGPAKHAVRSRSVGSGFLGEMKIKSVLERYPNQQFGSAGLL* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02333 415 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
Phac8g02333 415 Pfam Protein kinase domain 53 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02333 415 ProSiteProfiles Protein kinase domain profile. 50 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02333 415 Gene3D Transferase(Phosphotransferase) domain 1 122 327 - -
Phac8g02333 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Phac8g02333 415 SMART serkin_6 50 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02333 415 ProSitePatterns Protein kinases ATP-binding region signature. 56 80 IPR017441 GO:0005524
Phac8g02333 415 SUPERFAMILY Protein kinase-like (PK-like) 26 311 IPR011009 -
Phac8g02333 415 PANTHER OS01G0253100 PROTEIN 31 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02333 Phac-Chr8 32314514 32316495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02333 37 314 Receptor kinase-like Gene Family AT3G59420 41.017 3.71e-61 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Phac8g02333 Pkinase 8.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02333 - - vun:114194010 677.552