Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02325 ATGCGATCACCGAATGAGATGAAAAAGAAACGAAAAGAAAGCGAGGCCAGCGAGCGATCGAACTTGCCGGAGGTTTCGAAGTCGCATTACTCGCTAGAGCATAGTCCGAGGTTTAACAAACGGTGCAGGGAAGACTGCGTGGCCACGGTTCCCACTCGCAGCGCGTCGTCACTTTTGACCGCGTCACGGGGACTGAAGCGGAAGATAGGGTGCATTGACGAGGCCACGCGGATGGGAAGAAGCGTGAAGATCGAGAACGATTACCTGACAGGACAGGGCACGATCGGTCAGGGGAAGTTCGGGTCGGTGACAATTTGCCGCGCACGTGCGGGGGGCGTGGAGTACGCGTGCAAGACCCTGAGGAAAGGGGAGGAGACGGTGCACCGCGAGGTGGAGATAATGCAGCACGTGTCGGGTCACCCTGGGGTTGTAACTCTGAAAGCGGTGTATGAGGATGCGGAGTGTTGGCACCTTGTGATGGAGTTGTGCTCCGGGGGTAGGTTGGTTGATAGGATGAGGGAGGGGCCGTGTTCGGAACACATGGCGGCTGGGATACTGAAGGAGTTAATGATGGTTGTTAAGTATTGTCATGATATGGGCGTGGTGCATAGGGATATTAAGCCCGAGAATGTTCTGATTACAGGAACTGGGAAGATTAAGCTTGCTGATTTTGGTCTCGCCATCCGAATTTGTGAGGGTCAGAATTTGATAGGTGTGGCTGGGAGCCCTGCATATGTTGCACCGGAAGTGTTGTTGGGTAGATATTCTGAGAAGGTGGATATATGGAGTTCTGGGGTGCTCCTGCATGCTTTGTTGGTTGGTTTTCTTCCATTTAAAGGCGATTCACAGGAGGCACTTTTTGAGGAAATAAAAAATGTCAAACTAGATTTCCAAACGGGGGTGTGGGAATCGATATCCAAACCTGCTCGAGATCTTGTTGGGAGAATGTTGACAAGAGATGTTTCAGCAAGGATAACAGCTCATGAAGTACTGAGTCATCCATGGATATTGTTCTATACAGCGCAAACATTGAAGATGCTGCCCGTTAAATCAAAATTGAAACCCCAAAATGCAGCTATTTGCCACAAGTGTGTTACTGCACCTGAATCTGGGTTTGGAGGATACAGGGTGGATAATTGTTCCCTAAATGGTTCAAGCACGTTTTCATCCTCTGAAAGTTGCAATTCAGAATATCATGATGACTGTGCGTGGATTGATGCACTTGCCACTGCTGTTTCACATGTGACGATATCCGAAGCGAAGAGGACCAAGTTGTGGGGTCCCACTGGTCCAATTGATCCACAAGGTTCATCTAACTTGAAGACTAACCTCTGTAAAGCATTCTGA 1347 0.4944 MRSPNEMKKKRKESEASERSNLPEVSKSHYSLEHSPRFNKRCREDCVATVPTRSASSLLTASRGLKRKIGCIDEATRMGRSVKIENDYLTGQGTIGQGKFGSVTICRARAGGVEYACKTLRKGEETVHREVEIMQHVSGHPGVVTLKAVYEDAECWHLVMELCSGGRLVDRMREGPCSEHMAAGILKELMMVVKYCHDMGVVHRDIKPENVLITGTGKIKLADFGLAIRICEGQNLIGVAGSPAYVAPEVLLGRYSEKVDIWSSGVLLHALLVGFLPFKGDSQEALFEEIKNVKLDFQTGVWESISKPARDLVGRMLTRDVSARITAHEVLSHPWILFYTAQTLKMLPVKSKLKPQNAAICHKCVTAPESGFGGYRVDNCSLNGSSTFSSSESCNSEYHDDCAWIDALATAVSHVTISEAKRTKLWGPTGPIDPQGSSNLKTNLCKAF* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02325 448 ProSitePatterns Protein kinases ATP-binding region signature. 95 118 IPR017441 GO:0005524
Phac8g02325 448 CDD STKc_CAMK 87 335 - -
Phac8g02325 448 Pfam Protein kinase domain 93 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02325 448 FunFam Maternal embryonic leucine zipper kinase 85 370 - -
Phac8g02325 448 Gene3D Phosphorylase Kinase; domain 1 92 168 - -
Phac8g02325 448 Gene3D Transferase(Phosphotransferase) domain 1 169 365 - -
Phac8g02325 448 SMART serkin_6 89 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02325 448 MobiDBLite consensus disorder prediction 1 34 - -
Phac8g02325 448 PANTHER SERINE/THREONINE-PROTEIN KINASE 75 354 - -
Phac8g02325 448 SUPERFAMILY Protein kinase-like (PK-like) 88 367 IPR011009 -
Phac8g02325 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Phac8g02325 448 MobiDBLite consensus disorder prediction 1 22 - -
Phac8g02325 448 ProSiteProfiles Protein kinase domain profile. 89 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02325 Phac-Chr8 32136906 32140339 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02325 73 336 EF-hand Containing Proteins AT4G04720 43.273 1.48e-73 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phac8g02325 Pkinase 2.9e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02325 - - gmx:100809977 698.738