Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02302 ATGGCCCTAGAGGCCGTGGTTTTCCCTCAAGATCCATTCACTTATCCTTGCAACAAAGACTACTTCTACTCGCTATTACAAAACAATTTCCAACAAGTAGAAAACAAAGCCTTTGTAGGAATCATCACCAATAACATAGACCACACTCTGCATGCAAATTGGGATTCTTCTTCCCCTTCAGCTTTGCAAAATGTCAAAGACCAATGGGACTCACACTCCTCCCCTGAACCCTGCACCGTCGATCAGTCCCTCCCCGCCGCTTTTCCTCCTCCTCCCTCCTCCACCGAACCCACCACCGGCCGTCGCAAACGCCGCCGCACCAAGAGCACCAAAAACAAAGAGGAGATCGAGAATCAAAGAATGACCCACATTGCAGTTGAACGCAATCGAAGGAAACAGATGAATGAGTACCTCGCAGTTCTAAGATCCTTGATGCCACCGTCTTATGTTCAAAGGGGTGATCAAGCATCTATTATTGGTGGCGCCATTAACTTCGTGAAGGAGCTGGAGCAGCTTCTACAGTGCTTGAAAGGGCAGCAGAGAACAAAGGAAAATGGTGGTGGCTTCTCTGACTCATCACCCTTTGCTGAGTTCTTCATGTTCCCTCAGTACTCCACACGTGCGACACAGAATAGCAGAGGCTACCCCAGCACGTGCGAAGCACGGAGCCATTCATGGGCCGTGGCAGACATAGAAGTGACCCTGGTAGATGGTCATGCCAACATAAAGATACTCACCAAGAAACTACCAGGCTTGCTTCTGAAGATGGTTGTTGGCCTTCAAACTCTTGCCTTCACCATTCTCCACCTTAATGTTACCACTGTTGACGATATGGTCCTTACCTCGGTTAGTGTCAAGATAGAGGAAGGGTGTGAGGCGAAGACAGTGGACGAAATTGCAGGTGCTGTGCATGAATTATCCCACAGGATCCAGGAGGAAGCTGTTTTGAGCTGA 954 0.4895 MALEAVVFPQDPFTYPCNKDYFYSLLQNNFQQVENKAFVGIITNNIDHTLHANWDSSSPSALQNVKDQWDSHSSPEPCTVDQSLPAAFPPPPSSTEPTTGRRKRRRTKSTKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPSYVQRGDQASIIGGAINFVKELEQLLQCLKGQQRTKENGGGFSDSSPFAEFFMFPQYSTRATQNSRGYPSTCEARSHSWAVADIEVTLVDGHANIKILTKKLPGLLLKMVVGLQTLAFTILHLNVTTVDDMVLTSVSVKIEEGCEAKTVDEIAGAVHELSHRIQEEAVLS* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02302 317 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 118 169 IPR011598 GO:0046983
Phac8g02302 317 FunFam Basic helix-loop-helix transcription factor 109 184 - -
Phac8g02302 317 CDD bHLH_AtFAMA_like 121 194 - -
Phac8g02302 317 PANTHER MAX DIMERIZATION, MAD 70 314 - -
Phac8g02302 317 Gene3D - 109 185 IPR036638 GO:0046983
Phac8g02302 317 MobiDBLite consensus disorder prediction 57 80 - -
Phac8g02302 317 Pfam Helix-loop-helix DNA-binding domain 119 170 IPR011598 GO:0046983
Phac8g02302 317 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 118 181 IPR036638 GO:0046983
Phac8g02302 317 SMART finulus 124 175 IPR011598 GO:0046983
Phac8g02302 317 MobiDBLite consensus disorder prediction 57 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02302 Phac-Chr8 31697813 31700583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02302 1 287 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 48.418 7.60e-78 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac8g02302 HLH 6.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02302 - - gmx:100797856 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g02302 8 31697813 31700583 Phac8g02302 8 31697813 31700583 ECH
Phac8g02302 8 31697813 31700583 Phac9g00662 9 4472576 4474348 PCT