Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02271 ATGGCAAAGCCTAGTCTACTGTCTCTCCATGGTTATGGCATATTGATCACAATAATGCTATTCCTAAAGCTCATTCTTATCAAAGGTAGCAGCGATCATAACGAGTGCAGGGAGTTGTCTTGTGGGCCAAACCAAACCCCTATTAGATTTCCCTTCCAACTCGTCAAGGGGACGCATGAATGTGCTCATCCTGGGTATTGTCTGTATTGTACTCAAGAAAACAACACCATGCTTCTCCTCCCTACCATTAAACTCCACGTCATAAACATAGACTACGAAAATCGGCAAATTTACTTGAAAGACCCGAAGAATTGCCTTCCAAAATATTTTCTAAACCACAGCAATTCTTTTAATCATTATTACTTTACCGAAAGCAGCGTGAGCTTCTTTGATTGTTCTTCACTTCCGTATAGTCAACTCAGAAGTCAATATGGCTACTACCAAGATATGATCTCCTGTCCGATTTACGTTACTGATTCTCAAGCAAGTGTCTTGGAATGGGACCTGACATTCTGTTCTAAGATGTCCGATGTCACTGCACCAGTCTCGGCAAACGAGATGCTGCAGAATGAGTTCATGTTGACATGGTCCAAACCAGCTTGTACTGCGTGCGAAGCTGATGGCAAAAGATGTAAATGGAAGAACAACAGCACCGAAGTTATCGAATGTTTGGATTGCTCTGACCACAAGGGCCTCCATAAAAGAATCACAAATTTCAGATCTTTTATTTTTTCCAGTACAGTTATCGTAGGTTCAATTCTTTTTGGCCTGCTGGCCATTGTGGCCTTTAAGATTTTCCGCTATTTTAGAGAGAAGGAAGAAGACCAAGCAAGAGTGGACAAGTTCTTAGAGGATTACAGAGCAGAAAAGCCTACGAGATTTTCATACGCCGATGTCAAGAGAATCACCGATGGTTTTAAAGAAAAACTAGGGGAAGGAGCTCATGGAGCTGTTTTCAAAGGCAAACTTTCGAATGAGATTCTCGTGGCTGTGAAGATCATCAATAATACTGAAGGAGATGGGAATGAGTTCATCAATGAAGTTGGAATTATGGGAAAAATCCACCACATTCACGTGGTTCGTTTGCTAGGCTTTTGCGCCGAAGGAATCCATCGTGCTCTTGTCTACAATTTGTTTCCAAAGGGTTCACTACAAAGCTTCATATTTCCACCCGATGACAAGGACCATTTCCTTGGGTGGGAGAAGATGCAACAGATTGCTCTTGGTATAGCTAAAGGGATTGAGTATCTCCATCAAGGCTGTAATCATCCCATTATTCACTTTGACATCAATCCTCGCAATGTGTTACTTGATGACAACTTCACTCCAAAGATTTCTGATTTTGGATTAGCCAAATTGTGTTTCAAGAATCCAAGTTTGGTGTCCATGACAGCTGCTAGGGGAACTTTGGGATACATCGCACCAGAAGTTTTCTCCAGGAACTTCGGTAATGTATCCTACAAGTCTGATATTTACAGTTATGGAATGTTGTTGCTAGAAATGGTTGGAGGAAGGAAGAATGTAGACATGTCATCCTCAGAAAATGTCCATGTTCTGTACCCAGATTGGATCCATAACCTTGTTGATGGAGACATACATATCCATATTGAGTATGAAGGTGATGTTAAAATTGCGAAGAAGCTAGCCATTGTTGGACTTTGGTGCATTCAGTGGCAGCCAGTGAACCGTCCATCCATAAAATCTGTCATACAAATGCTAGAAACTAAAGGGGAAGAGCAGTTAACTGTGCCTCCTAATCCATTTCATTCAACGACTTCAACTACTGGTACGCTCACTTCAGCAAGAAGACCTTTGGAATTAGAAGCTATTCAAGAGTGA 1839 0.4149 MAKPSLLSLHGYGILITIMLFLKLILIKGSSDHNECRELSCGPNQTPIRFPFQLVKGTHECAHPGYCLYCTQENNTMLLLPTIKLHVINIDYENRQIYLKDPKNCLPKYFLNHSNSFNHYYFTESSVSFFDCSSLPYSQLRSQYGYYQDMISCPIYVTDSQASVLEWDLTFCSKMSDVTAPVSANEMLQNEFMLTWSKPACTACEADGKRCKWKNNSTEVIECLDCSDHKGLHKRITNFRSFIFSSTVIVGSILFGLLAIVAFKIFRYFREKEEDQARVDKFLEDYRAEKPTRFSYADVKRITDGFKEKLGEGAHGAVFKGKLSNEILVAVKIINNTEGDGNEFINEVGIMGKIHHIHVVRLLGFCAEGIHRALVYNLFPKGSLQSFIFPPDDKDHFLGWEKMQQIALGIAKGIEYLHQGCNHPIIHFDINPRNVLLDDNFTPKISDFGLAKLCFKNPSLVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDMSSSENVHVLYPDWIHNLVDGDIHIHIEYEGDVKIAKKLAIVGLWCIQWQPVNRPSIKSVIQMLETKGEEQLTVPPNPFHSTTSTTGTLTSARRPLELEAIQE* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02271 612 Pfam Wall-associated receptor kinase galacturonan-binding 36 101 IPR025287 GO:0030247
Phac8g02271 612 FunFam serine/threonine-protein kinase PBS1-like 271 378 - -
Phac8g02271 612 PANTHER RUST RESISTANCE KINASE LR10-RELATED 276 591 IPR045874 GO:0004672
Phac8g02271 612 Coils Coil 610 612 - -
Phac8g02271 612 SUPERFAMILY Protein kinase-like (PK-like) 287 574 IPR011009 -
Phac8g02271 612 MobiDBLite consensus disorder prediction 581 603 - -
Phac8g02271 612 Gene3D Transferase(Phosphotransferase) domain 1 379 584 - -
Phac8g02271 612 MobiDBLite consensus disorder prediction 584 601 - -
Phac8g02271 612 Pfam Protein tyrosine and serine/threonine kinase 306 573 IPR001245 GO:0004672|GO:0006468
Phac8g02271 612 Gene3D Phosphorylase Kinase; domain 1 277 378 - -
Phac8g02271 612 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Phac8g02271 612 FunFam PR5-like receptor kinase 379 585 - -
Phac8g02271 612 ProSiteProfiles Protein kinase domain profile. 304 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02271 Phac-Chr8 31030785 31032916 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02271 19 587 Receptor kinase-like Gene Family AT1G66910 33.281 2.43e-98 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac8g02271 PK_Tyr_Ser-Thr 3.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02271 - - gmx:100811907 848.966