Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02270 ATGGTCATATGGAGAGAGATGGTGTTATTGGTGATCTTCTTCCTGTTTGTAGTCCAACAAGTATGTACTACGAATGAGCAAGAGCATGCTATGGATTGTCCCACTTCTTCCTGCGGGAAAATCACAAACATAAGTCGGCCATTCAGATTGAAAAGTGATCCAATACATTGCGGCGACAGCAGGTACGAACTGGATTGTGAAAATAATGTTACGGTATTGTATTTGTACTCGGGAAAATATCATGTTGAGGCAATCAACTACCATAATTTCACAATCCGAGTGGTTGATCCGGGAGTTGAAGAACCAAGTTGCTCCTCCCTTCCTCGCTATTTCTTGTCTGAATCCAATTTTAGTGATGCTTATCATGGTGACGCCGTGGCTCCATACCGAACCACTCAAAGTCAATTCTCTGATGAATTGGGTAGTTACCAGAAGAGTCTTTTGAAGCACATAATTTACTTGAATTGTAGCCATCTAGTGATTGAGAAGAAAAAGTACGTGAATACTGCTCCGTGTGTGAAGTGGCAGTCGAAAGGCTACATGTATGCCATCGGTGGTGACATAACAGCAGCGGAACTTGAAGTTGGTTGTGGTGTAAAGCTGGTATCTCCGACGTCTTGGTGGGGTTTGGACGCAAATGAATCTTCCTACACTGATATGAACACGGCGTTACTTTATGGATTTGAGATGTCGTGGTTGCATTTCGCCTGTGACGATCAATGTCCAAGGTCAACTAATGGCGACTGCTCTTTCAACTCTGCCATCCCTAAGCTTCAATGCTCGCTCTGCGACGATATGTTATTCGGACGACTGCTAGTTCCGTGTGGTACAGGGATATGGTCACAGCTGCTACCTTATCCACAATATTTTTTGAAGAGTGTTTTCTTCGTACTGTTGGACACAATACAAGGATACCTAAGATTTGGTGCAAATTACTACTTTGATCCGGTATCATTTATCATAGGACGCTATGTTTTACCATTTTTCTTGGCAGTTAGATTTTTGTTTGGGGTGACATTACTTATTGTGCTTTTGGTATATAAGTGGAGGAAAAGACATTTGTCAATATATGAAAATATTGAAAATTATCTAGAACATAATAACTTGATGCCTATTAGATACTCTTATAAGGAAATCAAGAAGATGGTGAAAGGTTTCAAGGAAAAATTGGGTGAAGGAGGCTATGGCTCTGTGTTTAAGGGAAAGTTATCTAGTGGATCTTTTGTGGCAATAAAAATGTTAGGTAAATCAAAAGGTAGTGGACATGACTTTATCAGTGAAGTTGCCACCATTGGAAGAATACATCATCAAAATGTAGTACAATTAATTGGATTTTGTGTTGAGGGTTCGAGACGTGCTCTTGTTTATGAGTTCATGTCCAATGGATCTCTTGATAAAATTATTTTTTCTAAAGACAAAAGTATAGAACTTGGTTATGACAAAATATACAATATAGCAATTGGGGTAGCTCGTGGGATTGCTTATCTCCATCATGGATGTGAGATGCAAATTTTGCATTTTGATATAAAGCCCCATAATATTCTACTCGATGATAAATTCATTCCAAAGGTCTCTGATTTTGGATTGGCAAAGTTATATCCCATAGATAATAGCATTGTCACCATGACAGCAGTAGGAGGAACAATTGGATATATGGCTCCAGAATTGTTTTATAAAAATATTGGGGGAATATCATATAAGTCAGATGTTTATAGTTTTGGAATGCTTTTAATGGAGATGGCAAGCAGGAGGAAAAACTTAAATCCCCATGCAGAGAATTCAAGCCAAATTTATTTTCCCTCTTGGGTTTATGATCACATTAGAGAAGAGAAAGATATAAAAATGGAAGAAATGGAAGGTATCACAGAGGAGGAAAAGAAAATAGCAAAGAAGATGATCATAGTTGCATTTTGGTGTGTGCAAATGAATCCAAATGATCGTCCCTCCATGAACAAAGTAGTGGAAATGCTTGAAGGAGACATTGAAAAATTGGAAATCCCTCCAAATTTTTCTATATATCCATATGAAGCGACGGAAAACTCTAAACAAACAATAGCAACTGAATTTACTTGTTCTTCTAGTTATTCTTTGGGAATTGATTAA 2103 0.3804 MVIWREMVLLVIFFLFVVQQVCTTNEQEHAMDCPTSSCGKITNISRPFRLKSDPIHCGDSRYELDCENNVTVLYLYSGKYHVEAINYHNFTIRVVDPGVEEPSCSSLPRYFLSESNFSDAYHGDAVAPYRTTQSQFSDELGSYQKSLLKHIIYLNCSHLVIEKKKYVNTAPCVKWQSKGYMYAIGGDITAAELEVGCGVKLVSPTSWWGLDANESSYTDMNTALLYGFEMSWLHFACDDQCPRSTNGDCSFNSAIPKLQCSLCDDMLFGRLLVPCGTGIWSQLLPYPQYFLKSVFFVLLDTIQGYLRFGANYYFDPVSFIIGRYVLPFFLAVRFLFGVTLLIVLLVYKWRKRHLSIYENIENYLEHNNLMPIRYSYKEIKKMVKGFKEKLGEGGYGSVFKGKLSSGSFVAIKMLGKSKGSGHDFISEVATIGRIHHQNVVQLIGFCVEGSRRALVYEFMSNGSLDKIIFSKDKSIELGYDKIYNIAIGVARGIAYLHHGCEMQILHFDIKPHNILLDDKFIPKVSDFGLAKLYPIDNSIVTMTAVGGTIGYMAPELFYKNIGGISYKSDVYSFGMLLMEMASRRKNLNPHAENSSQIYFPSWVYDHIREEKDIKMEEMEGITEEEKKIAKKMIIVAFWCVQMNPNDRPSMNKVVEMLEGDIEKLEIPPNFSIYPYEATENSKQTIATEFTCSSSYSLGID* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02270 700 Pfam Protein kinase domain 387 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02270 700 PANTHER RUST RESISTANCE KINASE LR10-RELATED 357 676 IPR045874 GO:0004672
Phac8g02270 700 ProSiteProfiles Protein kinase domain profile. 384 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02270 700 FunFam serine/threonine-protein kinase PBS1-like 354 458 - -
Phac8g02270 700 Pfam Wall-associated receptor kinase galacturonan-binding 33 96 IPR025287 GO:0030247
Phac8g02270 700 ProSitePatterns Protein kinases ATP-binding region signature. 390 412 IPR017441 GO:0005524
Phac8g02270 700 SUPERFAMILY Protein kinase-like (PK-like) 369 658 IPR011009 -
Phac8g02270 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 504 516 IPR008271 GO:0004672|GO:0006468
Phac8g02270 700 SMART serkin_6 384 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02270 700 Gene3D Transferase(Phosphotransferase) domain 1 459 676 - -
Phac8g02270 700 FunFam PR5-like receptor kinase 459 668 - -
Phac8g02270 700 Gene3D Phosphorylase Kinase; domain 1 358 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02270 Phac-Chr8 31025820 31030353 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02270 11 673 Receptor kinase-like Gene Family AT5G38260 32.695 4.07e-110 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac8g02270 Pkinase 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02270 - - vun:114195039 1027.31