Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02267 ATGATGATCTCCTGTCCGATTTTCGCTACTGATTCTGAATCAAGTGTCTTGGAATGGGAGCTTACATTCTGTTCTAAGATGTCCGATGTCACTGCACCTGTCTCGGCATTCGATATGCTGCAGAATGAATTCATGTTGACATGGTCCAAACCAGCTTTTATCGTAGGTTCAATTCTTTTTGGCCTGCTGGTCATTGTGGCTTTTAAGATTTTCCGCTATTTTAGAGAGAAGGAAGAAGACCAAGTAAGAGTGGACAAGTTCTTAGAGGATTACAGAGCAGAAAAGCCTACGAGATTTACGAACGCCGATGTCAAGAGAATCACCGATGGTTTTAAAGAAAAACTAGGGGAAGGAGCCCATGGAGCTGTTTTCAAAGGCAAACTTTCGAATGAGATTCTCGTGGCTGTGAAGATCATCAATAATACTGAAGGAGATTGGAATGAGTTCATCAACGAAGTTGGAATTATGGGAAAAATCCACCACATTCACGTGGTTCGTTTGCTAGGCTTTTGCGCCGAAGGAATCCATCGTGCTCTTGTCTACAATTTGTTTCCAAAGGGTTCACTACGAAGCTTCATATTTCCACCCGATGACAAGGACCATTTCCTTGGGTGGGAGAAGATGCAACACATTGCTCTTGGTATAGCTAAAGGGATTGAGTATCTCCATCAAGGTTGTAATCATCCCATTATTCACTTTGACATCAATCCTCGCAATGTGCTACTTGATGACAACTTCACTCCAAAGATTTCTGATTTTGGATTATCCAAATTGTGTTTCAAGAATCCAAGTTTGGTGTCCATGACAGCTGCTAGGGGAACCTTGGGATACAGCGCACCGGAAGTTTTCTCCAGGAACTTCGGAAATGTATCCTACAAGTCTGATAAATGGAATGTTGTTGCTAGAAATGGTTGGAGGAAGGAAGAATGTAGACATGTCATCCTCAGAAAATATCCATGTTCTGTTCTGTACCCAGATTGGATCCATAACCTTGTTGATGGAGACATACATATCCATATTGAGTATGAAGGTGATGTTAAAATTGCGAAGAAGCTAGCCATTGTTGGACTTTGGTGCATTCAGTGGCAGCCAGTGAACCGTCCATCCATAAAATCTGTCATACAAATGCTAGAAACTAAAGAGGAAGACTAG 1152 0.4184 MMISCPIFATDSESSVLEWELTFCSKMSDVTAPVSAFDMLQNEFMLTWSKPAFIVGSILFGLLVIVAFKIFRYFREKEEDQVRVDKFLEDYRAEKPTRFTNADVKRITDGFKEKLGEGAHGAVFKGKLSNEILVAVKIINNTEGDWNEFINEVGIMGKIHHIHVVRLLGFCAEGIHRALVYNLFPKGSLRSFIFPPDDKDHFLGWEKMQHIALGIAKGIEYLHQGCNHPIIHFDINPRNVLLDDNFTPKISDFGLSKLCFKNPSLVSMTAARGTLGYSAPEVFSRNFGNVSYKSDKWNVVARNGWRKEECRHVILRKYPCSVLYPDWIHNLVDGDIHIHIEYEGDVKIAKKLAIVGLWCIQWQPVNRPSIKSVIQMLETKEED* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02267 383 PANTHER RUST RESISTANCE KINASE LR10-RELATED 83 380 IPR045874 GO:0004672
Phac8g02267 383 FunFam Os07g0541700 protein 184 274 - -
Phac8g02267 383 ProSitePatterns Protein kinases ATP-binding region signature. 115 137 IPR017441 GO:0005524
Phac8g02267 383 ProSiteProfiles Protein kinase domain profile. 109 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02267 383 Gene3D Phosphorylase Kinase; domain 1 82 183 - -
Phac8g02267 383 Pfam Protein tyrosine and serine/threonine kinase 111 297 IPR001245 GO:0004672|GO:0006468
Phac8g02267 383 SUPERFAMILY Protein kinase-like (PK-like) 93 379 IPR011009 -
Phac8g02267 383 Gene3D Transferase(Phosphotransferase) domain 1 184 383 - -
Phac8g02267 383 FunFam serine/threonine-protein kinase PBS1-like 76 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02267 Phac-Chr8 30972854 30974403 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02267 74 382 Receptor kinase-like Gene Family AT1G66980 43.260 1.70e-78 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac8g02267 PK_Tyr_Ser-Thr 2.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02267 - - gmx:100790964 561.222