Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02265 ATGTGGTTTGCTTGGTACCATTCAGCTTTTCCCTCTCTCTGCTTGTCGTTGAAGAGAAACCCTAGGGTTGTTAAGATTCTCGGTGGTAAGCTGGTTTACCAGAGCGCGAAGAAGAGGGCTAGTGGACCCAAGTGCCCTATTACTGGAAAGAGGATTCAAGGGATTGAACATTTAAGGCCTGAACAATACAAGAGATCAAGGTTACCTAGAAACCGTAGGACTATGAACCGGGCATACGGAGTTGGTGGTCACAATTCCAAATTTGACTTGTGTTCAGGAACGGGGTACCTGACTGCGTGCTTTGCCTTGATGGTTGGACCCCTAGGTCGTGTTGTTGGTGTAGAGCATATTCCTGAATTGGTTTCTTTTTCGATAGAGTATATTCAGAAAAGCGTTGCTGCTACACAATTGAAAGATGGTTCCCTTTCTGATCACGCTAGTGATGGTAGGGAAGGTTGGCCAGAGTTTTCACCTTATGATACCATTCACGTTGGAGCAACAACACCAGAAATTCCCCAACCACTTATTAACCAGTTGAAGCCTGGAGGTAGAATGATGATTCCTGTCGGAAACATAGCTAGAGAGGCCGACCTTAGGGTTCATTTCAACAACACTAGGGAAACTCCATTTGCAATCAGGAAGTTGTCCCTGGTTAAGGCAAGAAGGTACTTGGAAGATGTTCTTGCCCATAAACAAGCCATTCCGTTTAGACGTTTCTGTTGTAGTGTTGGAAGGACAACCCAAGCAAAGAGTAGACACTCTAATGGCCAAGGAAGGTGGCTTGTCAAATCAGCAAAATTCATCCTTAATTTACTTAAAAATGTCGAGAGCAATGTTGAAGTGAAAGGTTTGGATGTTGATGCGCTTTACATTTCCCATATCCAAGTCAAGCGCAAAAGCAAAGACGCCAACCATACCGAGCCCATGGAAGAATCAATCCTTATATGTCATCCCCGTGCCACATAG 966 0.4462 MWFAWYHSAFPSLCLSLKRNPRVVKILGGKLVYQSAKKRASGPKCPITGKRIQGIEHLRPEQYKRSRLPRNRRTMNRAYGVGGHNSKFDLCSGTGYLTACFALMVGPLGRVVGVEHIPELVSFSIEYIQKSVAATQLKDGSLSDHASDGREGWPEFSPYDTIHVGATTPEIPQPLINQLKPGGRMMIPVGNIAREADLRVHFNNTRETPFAIRKLSLVKARRYLEDVLAHKQAIPFRRFCCSVGRTTQAKSRHSNGQGRWLVKSAKFILNLLKNVESNVEVKGLDVDALYISHIQVKRKSKDANHTEPMEESILICHPRAT* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02265 321 Gene3D - 40 85 - -
Phac8g02265 321 Gene3D Ribosomal protein L22/L17 191 307 IPR036394 GO:0003735|GO:0005840|GO:0006412
Phac8g02265 321 CDD AdoMet_MTases 89 189 - -
Phac8g02265 321 PRINTS Ribosomal protein L34 signature 67 89 IPR008195 GO:0003735|GO:0005840|GO:0006412
Phac8g02265 321 PRINTS Ribosomal protein L34 signature 45 55 IPR008195 GO:0003735|GO:0005840|GO:0006412
Phac8g02265 321 PRINTS Ribosomal protein L34 signature 27 44 IPR008195 GO:0003735|GO:0005840|GO:0006412
Phac8g02265 321 Pfam Ribosomal protein L22p/L17e 193 300 IPR001063 GO:0003735|GO:0005840|GO:0006412
Phac8g02265 321 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 88 198 - -
Phac8g02265 321 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 89 201 IPR029063 -
Phac8g02265 321 Pfam Ribosomal protein L34e 21 80 IPR008195 GO:0003735|GO:0005840|GO:0006412
Phac8g02265 321 PANTHER 60S RIBOSOMAL PROTEIN L17 193 306 IPR005721 GO:0003735|GO:0006412|GO:0015934
Phac8g02265 321 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 147 162 IPR000682 GO:0004719|GO:0036211
Phac8g02265 321 NCBIfam 50S ribosomal protein L22 193 300 IPR005721 GO:0003735|GO:0006412|GO:0015934
Phac8g02265 321 SUPERFAMILY Ribosomal protein L22 193 298 IPR036394 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02265 Phac-Chr8 30928777 30930685 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02265 193 306 Cytoplasmic Ribosomal Protein Gene Family AT1G27400 74.561 1.18e-54 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02265 K02880 - gmx:100800781 185.267