Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02263 ATGGTCAGGTGGAGAAAGATGGTGTTATTGGTGATCTTCTTCCTGTTTGTAGTCCAACAAATATGTGCTACGCATGAGCAAGAGCATACTATGGATTGTCCCACTTCTTCCTGCGGGAAAATCACAAACATAAGTCGGCCATTCAGATTGAAACGTGATCCGATACATTGCGGCGACAGCAGGTACGAACTGGATTGTGAAAATAATGTTACCGTGTTGTATCTGTTCTCGGGAAAATATCATGTTCAGGCAATAAACTACAATAATTTCACAATTCGAGTGGTTGATCCGGGAGTTGAAGAACCAAATTGCTCCTCCCTTCCTCGCTATTTCTTGTCTCAATCCAATTTCACTGATGGTTATTTCATTGACGTCATGGCTCCATACCTAAACTCTCAATACCAATCTCATCAATCTGGTCCTGAGTGGAATAGTCTTTGGAAGCACATAATTTACTTGAATTGTAGCCATCCAGTGAGTGAGAAGAATAAGTACGTGAATACTGCTCCGTGTGTGAAGTGGCAGTCGAAAGGCTACATGTATGCCACCGCTGCTGATTACTTAACAGCATCGGAACTTAAAGTAGGTTGCGGTGTAAAGCTGGTGTCTCCGACGTCATGGTGGGGTTTGGACGCAAATGAATCTTCCTACACTGATATGAACAGGGCGCTACTTTATGGATTTGAGATGTCGTGGTTGCATTTCGCCTGTGATCATCAATGTCGAAAGTCATCCGATGACGAGTGCTCTTTCAACACTTCCAGCCTCAAGCTTCAATGCGCGCCCTTGTGCCAAGATAAATTTGGAATACTGCTAGTTCGGTGTGGTACAGGGATATGGTCACAGCTGTTAGCTTATCCACAATATTTTTTTGAGAATGTTTGCAGAGATTTTTTTGAGAATCTTTGGAGAGTACTGCTTGACACAATAACACTAGGAAAGCTAAGATTTGGTTCAAACTTCTACTTTGGTTCAGTACCATTTATTATAGGACGCTATCTTCTACCATCTTTCTTGGCAGTCAGATTTTTGTTTGGGATGACATTACTTATTGTGCTTTTGGTATACAAATGGCGGAAAAGGAATTTGTCAATATATGAAAATATTGAAAATTATCTCGAACACAATAACATGATGCCTATTAGATACTCATACAAGGAAATTAAGAAAATGGTGAAAGGTTTCAAAGAAAAGTTGGGTGAAGGAGGCTATGGCTGTGTGTTTAAGGGAAAGTTGTCTAGTGGATCTTATGTGGCAATAAAAATGTTAGGTAAATCAAAAGGTAGTGGACAGGACTTTATCAGTGAAGTTGCCACCATTGGAAGAATACATCATCAAAATATAGTGCAATTAATTGGATTTTGTGTTGAGGGTTCGAGACGTGCTCTTGTTTATGAATTCATGTCCAATGGATCTCTTGATAAAATTATTTTTTCTAAAGACAAAAATATAGAATTTGGCTATGACAAAATATACAATATAGCAATTGGGATAGCTCGTGGGATTGCTTATCTCCACCATGGATGTGAGATGCAAATTTTGCATTTTGATATAAAACCCCATAATATTCTACTTGATGATAAATTCAATCCAAAGGTCTCTGATTTTGGATTGGCAAAGTTATATCCCATAAATAATAGCATTGTCACCATGACAGCAGTAGGAGGAACAATTGGATATATGGCTCCAGAATTGTTTTATAAAAATATTGGAGGAATATCCTATAAGTCTGATGTTTATAGTTTTGGAATGCTTTTAATGGAGATGGCAAGCAGGAGGAAAAACTTAAATCCCCATGCTGAGAATTCAAGCCAAATTTATTTTCCCTCTTGGGTTTATAATCACATTAGAGAAGAGGAAGATATAAAAATAGAAGAAATGGAAGATATCACAGAGGAGGAAAAGAAAATAGCAAAGAAGATGATCATAGTTGCATTTTGGTGTATACAAATGAATCCAAATGATCGTCCCTCCATGAACAAAGTAGTGGAAATGCTTGAAGGAGACATTGAAAAATTGGAAATCCCTCCAAATTTTTCTTTATATCCATATGAAGCAACAGAAAACTCTAAACAAACAATAGCAACTGAATTTACTTGTTCTTCTAGTTATTCTTTGGAAATTGATGAATCCAATAAAGAATAA 2145 0.3739 MVRWRKMVLLVIFFLFVVQQICATHEQEHTMDCPTSSCGKITNISRPFRLKRDPIHCGDSRYELDCENNVTVLYLFSGKYHVQAINYNNFTIRVVDPGVEEPNCSSLPRYFLSQSNFTDGYFIDVMAPYLNSQYQSHQSGPEWNSLWKHIIYLNCSHPVSEKNKYVNTAPCVKWQSKGYMYATAADYLTASELKVGCGVKLVSPTSWWGLDANESSYTDMNRALLYGFEMSWLHFACDHQCRKSSDDECSFNTSSLKLQCAPLCQDKFGILLVRCGTGIWSQLLAYPQYFFENVCRDFFENLWRVLLDTITLGKLRFGSNFYFGSVPFIIGRYLLPSFLAVRFLFGMTLLIVLLVYKWRKRNLSIYENIENYLEHNNMMPIRYSYKEIKKMVKGFKEKLGEGGYGCVFKGKLSSGSYVAIKMLGKSKGSGQDFISEVATIGRIHHQNIVQLIGFCVEGSRRALVYEFMSNGSLDKIIFSKDKNIEFGYDKIYNIAIGIARGIAYLHHGCEMQILHFDIKPHNILLDDKFNPKVSDFGLAKLYPINNSIVTMTAVGGTIGYMAPELFYKNIGGISYKSDVYSFGMLLMEMASRRKNLNPHAENSSQIYFPSWVYNHIREEEDIKIEEMEDITEEEKKIAKKMIIVAFWCIQMNPNDRPSMNKVVEMLEGDIEKLEIPPNFSLYPYEATENSKQTIATEFTCSSSYSLEIDESNKE* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02263 714 SMART serkin_6 393 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02263 714 PANTHER RUST RESISTANCE KINASE LR10-RELATED 366 686 IPR045874 GO:0004672
Phac8g02263 714 Gene3D Phosphorylase Kinase; domain 1 367 467 - -
Phac8g02263 714 FunFam serine/threonine-protein kinase PBS1-like 363 467 - -
Phac8g02263 714 ProSiteProfiles Protein kinase domain profile. 393 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02263 714 Pfam Protein kinase domain 396 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02263 714 Pfam Wall-associated receptor kinase galacturonan-binding 33 96 IPR025287 GO:0030247
Phac8g02263 714 SUPERFAMILY Protein kinase-like (PK-like) 377 667 IPR011009 -
Phac8g02263 714 FunFam PR5-like receptor kinase 468 677 - -
Phac8g02263 714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 513 525 IPR008271 GO:0004672|GO:0006468
Phac8g02263 714 ProSitePatterns Protein kinases ATP-binding region signature. 399 421 IPR017441 GO:0005524
Phac8g02263 714 Gene3D Transferase(Phosphotransferase) domain 1 468 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02263 Phac-Chr8 30904866 30917442 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02263 11 682 Receptor kinase-like Gene Family AT5G38260 33.815 1.24e-109 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac8g02263 Pkinase 1.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02263 - - vun:114195039 988.408