Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02261 ATGAATCAAAACCAGCTGCAGCCCCTGCCTCTGCTTAGTAGCTTCCTAGGTTCATCTCCCCAAGAAGCTTTGCTACAAAACCAAAACTCTAAAGCATACCATGGTCAAGTTGAGGATGTCACTGTGGCCTTACACATAGGCCTCCCCAACAATTCAAGTGGCTCCACCAATAATCATGGATTTGTGAATGCTACAACTCATGCTCCTAGCAACTACTGGATACCAACTCAAGAACAGATCCTCATAGGCTTTAGCCATTTCTCTTGTCCCGTCTGCCTCAAAACCTTCAATCGCTACAACAATCTTCAGATGCATATGTGGGGGCACGGGTCACAGTATCGCAGAGGACCAGACTCGCTGAAGCGAACCCATCCACGACCCTTGTTGGACATTCCCTGCTACTGTTGCTCCAGAGGGTGCAAGAACAACATCGACCACCCACGTGCGAAGCCTCTGAAGGACTTTCGCACGCTTCAAACGCACTTCAAGAGGAAGCATGGCGCCAAGCCCTTCACGTGCCGCAAGTGCGCCAAGCCTTTGGCCGTGAAAGGTGACTGGCGAACCCACGAGAAAAACTGCGGCAAACGCTGGCTCTGCATTTGTGGCTCCGACTTCAAACATAAGAGGTCCCTCAAAGATCATATCAGAGCCTTTGGCTTTGGTCACACCCCTTTCACTTCTTCTTCTGATGCCATGTAG 699 0.5036 MNQNQLQPLPLLSSFLGSSPQEALLQNQNSKAYHGQVEDVTVALHIGLPNNSSGSTNNHGFVNATTHAPSNYWIPTQEQILIGFSHFSCPVCLKTFNRYNNLQMHMWGHGSQYRRGPDSLKRTHPRPLLDIPCYCCSRGCKNNIDHPRAKPLKDFRTLQTHFKRKHGAKPFTCRKCAKPLAVKGDWRTHEKNCGKRWLCICGSDFKHKRSLKDHIRAFGFGHTPFTSSSDAM* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02261 232 Gene3D Classic Zinc Finger 86 109 - -
Phac8g02261 232 ProSitePatterns Zinc finger C2H2 type domain signature. 89 109 IPR013087 -
Phac8g02261 232 Gene3D Classic Zinc Finger 149 219 - -
Phac8g02261 232 FunFam zinc finger protein WIP2-like 86 109 - -
Phac8g02261 232 ProSiteProfiles Zinc finger C2H2 type domain profile. 87 114 IPR013087 -
Phac8g02261 232 SUPERFAMILY beta-beta-alpha zinc fingers 82 109 IPR036236 -
Phac8g02261 232 FunFam Zinc finger protein WIP2 140 222 - -
Phac8g02261 232 PANTHER ZINC FINGER PROTEIN WIP2 9 226 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02261 Phac-Chr8 30867912 30869329 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02261 1 227 C2H2 Transcription Factor Family AT1G34790 58.635 5.66e-100 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac8g02261 zf-C2H2_6 6e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02261 - - var:108336851 461.455