Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02260 ATGAATCAAAACCAGCTGCAGCCCCTGCCTCTGCTTAGTAGCTTCCTAGGTTCATCTCCCCAAGAAGCTTTGCTACAAAACCAAAACTCTAAAGCATACCATGGTCAAGTTGAGGATGTCACTGTGGCCTTACACATAGGCCTCCCCAACAATTCAAGTGGCTCCACCAATAATCATGGATTTGTGAATGCTACAACTCATGCTCCTAGCAACTACTGGATACCAACTCAAGAACAGATCCTCATAGGCTTTAGCCATTTCTCTTGTCCCGTCTGCCTCAAAACCTTCAATCGCTACAACAATCTTCAGGTACAGTTTTTTCGTATTCTGTCATGGAGATTTTTGCATGGTACTCTTCATGTGAAGCCTTCCACAGTGTTAACATGGTATAGTGCTGTTTCTAGATTAAGTAATGAACTATGTATTCTAAGCGTAGCGAGTGAAATGGAATAA 453 0.4238 MNQNQLQPLPLLSSFLGSSPQEALLQNQNSKAYHGQVEDVTVALHIGLPNNSSGSTNNHGFVNATTHAPSNYWIPTQEQILIGFSHFSCPVCLKTFNRYNNLQVQFFRILSWRFLHGTLHVKPSTVLTWYSAVSRLSNELCILSVASEME* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02260 150 PANTHER ZINC FINGER PROTEIN WIP2 9 104 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02260 Phac-Chr8 30867912 30869329 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02260 1 107 C2H2 Transcription Factor Family AT1G34790 37.984 1.70e-16 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac8g02260 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02260 - - var:108336851 178.718