Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02259 ATGGCTTACCCACATTACCGATCACAGTTCGGAGACACCACGTTCACTAAGGTCTTCGTTGGAGGCCTAGCTTGGGAGACTCCAACCGAAGAAATGCGCAAATATTTTGAGCAGTTTGGTGAGATTCTTGAAGCTGTCATTATCACTGATAAGAACACTGGAAAATCTAAAGGCTACGGATTCGTAACATTCCGTGATCCAGAATCAGCTAGAAGGGCATGTGCTGATCCAAACCCAGTGATAGATGGAAGAAGAGCAAATTGTAACATTGCTTCTCTCGGAAGACCTAGACCATCACCACCAAGAGGAAGAGGAACATTCCAAGGAGGAGCACCGGGAACAGCTTCATACAGTGGTGTGCCGGCGGCTGGACCGTCAGCACTAGCACCGCCGCCACCACCACCACCACCACCGCTGGTGTACCCGCCATATGGCTACCCTACCTACACCCCTGATTATGGGTACCATCAAGCCACATTGTATAACCCACAAATTCAGCAACCACAATACTACCAACAACTCTATGGACCATCCTCCTCCACCATGGCTTCCCCATATTACTATGGCTATTCTGTGCAAGCACCAAGAGGTACCTTTTCTACACCCCAACCACATCGCATACCAGCTGGACCCTCTTATCTATACTACCCTACACCAATGGAAGGCTCATTTTCTGCATACCGTCCACCACCTCAATTGCAACAACTTCCAATAAGGCAACCCCCTCCTTCCCCTAGTGACTCACAGACTCAGCAACGTACCTCGTCCGAGGCAGCAGGTGGAGTAGTTATAACTTCCGAAAGTTCAAATACCCAAGGGAGGAACTGA 828 0.494 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRKYFEQFGEILEAVIITDKNTGKSKGYGFVTFRDPESARRACADPNPVIDGRRANCNIASLGRPRPSPPRGRGTFQGGAPGTASYSGVPAAGPSALAPPPPPPPPPLVYPPYGYPTYTPDYGYHQATLYNPQIQQPQYYQQLYGPSSSTMASPYYYGYSVQAPRGTFSTPQPHRIPAGPSYLYYPTPMEGSFSAYRPPPQLQQLPIRQPPPSPSDSQTQQRTSSEAAGGVVITSESSNTQGRN* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02259 275 Gene3D - 3 111 IPR012677 -
Phac8g02259 275 SMART rrm1_1 17 89 IPR000504 GO:0003723
Phac8g02259 275 PANTHER BOULE-RELATED 6 253 - -
Phac8g02259 275 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 75 IPR000504 GO:0003723
Phac8g02259 275 SUPERFAMILY RNA-binding domain, RBD 9 117 IPR035979 GO:0003676
Phac8g02259 275 MobiDBLite consensus disorder prediction 245 275 - -
Phac8g02259 275 FunFam RNA-binding protein 24-B isoform X1 3 112 - -
Phac8g02259 275 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 93 IPR000504 GO:0003723
Phac8g02259 275 CDD RRM_RBM24_RBM38_like 16 91 - -
Phac8g02259 275 MobiDBLite consensus disorder prediction 90 136 - -
Phac8g02259 275 MobiDBLite consensus disorder prediction 223 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02259 Phac-Chr8 30840398 30845721 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02259 12 92 C2H2 Transcription Factor Family AT2G19380 40.741 1.42e-15 74.7