Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02223 ATGACGAACCGTAATGTGAATAACACTCTTCTGGAGTTTGCAATGTCGATTTCAAACTCAAGTGCTCTACCTAGAGCCGCAGTGCCTGGAATAATGGCTTTGCTTGGTGGGGTTTTAGGCCTACCCCAGAAAAAGCTCTTATTGAAAACTTTGGAGGATGGAAGTGGAAAAGGAGGAACCAAAGTTAACACATGGATTGATTCAATGAGAGCTTCTTCTCCCACACGAGTCAAATCCACACAGAACCAAGACCCGAGTCCTTGGACTCTTTACCACCCTTCGGCACTGAACCTGTTTGATCAGATTATATGTGAGTCCAAAGGGAAGCAGATTGTCACTTTTCTTGACTATGATGGAACTCTCTCCCCAATTGTTGCAGACCCAGATAAAGCATACATGAGTCAAAAGATGAGGGCCACATTGAAGGACATAGCAAGGCATTTCCCCACTGCCATCGTGAGTGGAAGGTGCATAGACAAGGTGTATAGCTTTGTGAGATTGGCAGAACTGTACTATGCTGGGAGCCATGGAATGGACATCAAGGGACCAACAAATAGGCGAAGTACTAAGAAAGGAAACGAAGCAGTACTCTTCCAACCCGCGAGTGAATTCTTACCCATGATCAATGAGGTGTACAACATCTTGGTGGATAAAACAAAGTCTGTCCCCGGGGCTAAGGTAGAAAATAACAAGTTTTGTTTGTCCGTGCACTTTCGCTGTGTTGACGAAAAGAGTTGGGCATCATTGGCTGAACAAGTGAGCTTGGTCCTCGAACACTACCCCAAACTTAAGCTAACTCAAGGCAGAAAAGTGCTTGAGATTCGACCAACCATAAAATGGGACAAGGGCAAGGCTCTTGAATTCTTGCTAGAATCACTTGGATATGGTAACTCTGATAATGTATTTCCAATCTATATTGGTGATGATCGAACTGACGAAGATGGTTTTAAGGTTTTACGGAAGAGGGGTCAAGGGATTGGGATTCTTGTTTCTAAAATTCCAAAAGAAACCGATGCTTCCTACACTTTGCAAGATCCAACTGAGGTTGGGCAGTTTTTGCGGCATTTGGTGGAGTGGAAAAGAACGAGTACCCAATACCACAAGTTGTAG 1110 0.4414 MTNRNVNNTLLEFAMSISNSSALPRAAVPGIMALLGGVLGLPQKKLLLKTLEDGSGKGGTKVNTWIDSMRASSPTRVKSTQNQDPSPWTLYHPSALNLFDQIICESKGKQIVTFLDYDGTLSPIVADPDKAYMSQKMRATLKDIARHFPTAIVSGRCIDKVYSFVRLAELYYAGSHGMDIKGPTNRRSTKKGNEAVLFQPASEFLPMINEVYNILVDKTKSVPGAKVENNKFCLSVHFRCVDEKSWASLAEQVSLVLEHYPKLKLTQGRKVLEIRPTIKWDKGKALEFLLESLGYGNSDNVFPIYIGDDRTDEDGFKVLRKRGQGIGILVSKIPKETDASYTLQDPTEVGQFLRHLVEWKRTSTQYHKL* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02223 369 FunFam Trehalose 6-phosphate phosphatase 201 277 - -
Phac8g02223 369 SUPERFAMILY HAD-like 114 360 IPR036412 -
Phac8g02223 369 Gene3D - 217 368 IPR023214 -
Phac8g02223 369 Gene3D - 111 195 IPR023214 -
Phac8g02223 369 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 55 367 IPR044651 GO:0004805|GO:0005992
Phac8g02223 369 NCBIfam HAD-IIB family hydrolase 114 321 IPR006379 -
Phac8g02223 369 FunFam Trehalose 6-phosphate phosphatase 207 366 - -
Phac8g02223 369 Pfam Trehalose-phosphatase 114 346 IPR003337 GO:0003824|GO:0005992
Phac8g02223 369 NCBIfam trehalose-phosphatase 109 357 IPR003337 GO:0003824|GO:0005992
Phac8g02223 369 CDD HAD_TPP 114 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02223 Phac-Chr8 30089265 30091962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02223 107 364 Trehalose Biosynthesis Gene Families AT1G06410 27.007 1.69e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02223 K01087 - gmx:100792915 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g02223 8 30089265 30091962 Phac9g00734 9 5200340 5203374 PCT