Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02221 ATGGCAGCTATGATGGATTTGTACAACGGAGAACCACAAGTTCAGTCGGATCCATTCACAGGTGAGCTGATGGAAGTTCTAGAACCTTTTATGAAAAGTCCTTCCTCAACTCCCTCGTTATCTTCAGATTCAGCTTTACCTTCAACTTCGACTTCCTATTCCTACTCTCCTTACCCTCTTTCTCTCCCTCCACACCCCAATTTCTACACAGACCCTTCCTCCTCCTACCTATACCAAACCCAAACCCTTATAGGCTTTCAACAGCAACCCAGTTCTGTTGTCGGGCTCAACCACCTAAGGCCGTTTCAGGTTTCTCAGATCCAGGCTCAGATGCAGGCTCAGAGCCAGACCTCCCTCTCCCTGAACTTCCTCGGCCCGAAGCCCGTGGCAATGAAGCAAGTGGGTGGGGCTCCGAAGCCCGCGAAGCTGTACCGCGGGGTGAGGCAGAGGCATTGGGGAAAGTGGGTGGCAGAGATCAGGCTCCCCAAGAACCGCACCAGGCTCTGGCTCGGAACCTTCGACACTGCCGAGGAAGCCGCTTTGGCGTATGACAAAGCCGCCTACAGACTCCGAGGCGACTTCGCCAGGCTCAACTTCCCGAACCTCAAAGGGTCGTTGCTCGGCGAGTACAAGCCTCTGCAGTCCGCGGTGGACGCTAAGCTCGACGCCATTTGTCAGAGCCTGGCCGAAATGCCGAAGCAGGGGAAGACGGAGAAGGGTGCCAGGTCATCATCCAAGAAGTCAAAAGCAGCTCCAAAGGAGGCTCGGAATCCGAACCAGGATCCCAACCCCAACCTTCCTTGTAAGGCGGAGCCTGAGCCTGAAGCCGAACCTGCTCTGTCCCCTGAAAGTGAGGGTTCTGTGGATTCTTCTCCGCTCTCTGATCTCACCTTTGATGTCAGCGAACCGCAATGGGAAGATGCTTCTGCACATTTTAACTTGCAGAAATTTCCTTCTTATGAGATCGATTGGGATTCTCTCTGA 984 0.5396 MAAMMDLYNGEPQVQSDPFTGELMEVLEPFMKSPSSTPSLSSDSALPSTSTSYSYSPYPLSLPPHPNFYTDPSSSYLYQTQTLIGFQQQPSSVVGLNHLRPFQVSQIQAQMQAQSQTSLSLNFLGPKPVAMKQVGGAPKPAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYRLRGDFARLNFPNLKGSLLGEYKPLQSAVDAKLDAICQSLAEMPKQGKTEKGARSSSKKSKAAPKEARNPNQDPNPNLPCKAEPEPEAEPALSPESEGSVDSSPLSDLTFDVSEPQWEDASAHFNLQKFPSYEIDWDSL* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02221 327 SMART rav1_2 143 206 IPR001471 GO:0003700|GO:0006355
Phac8g02221 327 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 5 327 - -
Phac8g02221 327 Gene3D AP2/ERF domain 143 201 IPR036955 GO:0003700|GO:0006355
Phac8g02221 327 PRINTS Ethylene responsive element binding protein signature 166 182 IPR001471 GO:0003700|GO:0006355
Phac8g02221 327 PRINTS Ethylene responsive element binding protein signature 144 155 IPR001471 GO:0003700|GO:0006355
Phac8g02221 327 SUPERFAMILY DNA-binding domain 143 201 IPR016177 GO:0003677
Phac8g02221 327 MobiDBLite consensus disorder prediction 284 298 - -
Phac8g02221 327 FunFam Ethylene-responsive transcription factor 2 142 201 - -
Phac8g02221 327 ProSiteProfiles AP2/ERF domain profile. 143 200 IPR001471 GO:0003700|GO:0006355
Phac8g02221 327 Pfam AP2 domain 144 192 IPR001471 GO:0003700|GO:0006355
Phac8g02221 327 MobiDBLite consensus disorder prediction 232 302 - -
Phac8g02221 327 MobiDBLite consensus disorder prediction 235 254 - -
Phac8g02221 327 CDD AP2 142 202 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02221 Phac-Chr8 29990030 29992131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02221 1 327 AP2-EREBP Transcription Factor Family AT1G78080 48.739 5.73e-87 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac8g02221 AP2 1.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02221 K09286 - gmx:100802961 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g02221 8 29990030 29992131 Phac9g00736 9 5253782 5255712 PCT