Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02192 ATGAAGAAGGTCACAACAATTGCTTCAATCTTTTTGATCGCGCTACTTTGTTTGCACGAACTCGTCCACGTATCTTCGTCACCTTTCTTATACGCAAGCCAGGTCTATGAGGAATCTTCTGGTGAAAGAAAACTTAAACAGGACCAGGAACAGGGACAGGAACATGCTCAAGAATTGCATTGCTCCAGGGAGAGAAGTAGGGCAGCTCGGAAAGTGATAGAGGAGTATTTGATACCATTTGTGGAACGAGAAAACTACCAGCTTTCAACTAAATGCAGACTTCACCCTGAAAATGATATATTTAGCGATCAGGAAGAGCATAAAATTTTCATAGATAGACATGAATGGCGGTGTGGATATTGCAAGAAAAGCTTTCGGGAAGAGAAATTTCTCGATCAGCATTTTGATAACAGACACTACAATCTTCTGAATCTGAGGTTACATACTTGTGTCAATATTTGGCTCTGTTGTGATCTGAAGATTTACTTAAGTTTATCTGATTTGTTCACTCAGTTTGTCCCTCCTATTATGGATGACTGGAAGGAGGATGGGGGTTGTTTGGTGACAGGGACCACACACTCTTCCTCCCTCAACTCCTCAGCAAGTTTCCTTAAATTGATATAA 624 0.4087 MKKVTTIASIFLIALLCLHELVHVSSSPFLYASQVYEESSGERKLKQDQEQGQEHAQELHCSRERSRAARKVIEEYLIPFVERENYQLSTKCRLHPENDIFSDQEEHKIFIDRHEWRCGYCKKSFREEKFLDQHFDNRHYNLLNLRLHTCVNIWLCCDLKIYLSLSDLFTQFVPPIMDDWKEDGGCLVTGTTHSSSLNSSASFLKLI* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02192 207 ProSitePatterns Zinc finger C2H2 type domain signature. 118 139 IPR013087 -
Phac8g02192 207 ProSiteProfiles Zinc finger C2H2 type domain profile. 116 139 IPR013087 -
Phac8g02192 207 PANTHER ZINC FINGER PROTEIN-RELATED 10 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02192 Phac-Chr8 29518158 29522616 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02192 32 151 C2H2 Transcription Factor Family AT5G63280 55.833 2.12e-43 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02192 - - var:108323656 267.7