Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02156 ATGAACTCTTCATCGACTCAACTAGTCCTCGCGAAAAGGATGGGTATATATGATCCATTCCATCAAGTGAACATGTGGGGGGACACCTTTAAAATTGATGGAAGCTTGAATTCAATTGCTACGCCAATGTTCATGACGAAGTCTAGCATGCAGAACAAGTCTGAATGTACTCCTCATGAATCAAGGGAACCTTCTGGAGATGATCAAGAGACTAATGAGAAAGCTGACAGTAAGGTGCTAAGACGTCAAGCTCAAAATCGTGAGGCTGCACGAAAATGTCGGCTGCGGAAGAAGGCTTATGTTCAGCAATTAGAAACAAGCCGTGTGAAGCTTATGCAATTGGAATTGGAGATTGAGAAAGCAAAAAAGCAGAGTATGTACATACGCAGTGCACCAGATGTTAGTTATATGGGATCATCTGGAACAATTAACCCAGGGATAGCCTTGTTTGAACTCGAATATGGACAATGGATTGAAGAGCTCTGTAGACAAAATGAAGAACTGAGAAATGCATTACAAACTCGTGAATCTGATATGCAGCTTCATCTACTTGTTGAGAGTTGCCTGAGCCACTACTCAAATCTTTTCAGGATGAAAGCAGAGGCAGCAAAAGCCGATGTCTTTTATTTGATCTCTGGTGTATGGAAAGCATCAGTGGAACGCCTTTTTCTTTGGATTGGAGGATCTCGTCCATCGCAGCTTCTAAATATTATTGTTCCACAGCTTGAGCCTTTGACTGATCAACAAATTGTGAGCATTAACAACCTCCGGCTTTCATCTCAGCAAGCTGAAGATGCCCTTTCACTTGGATTGGAGAAACTCCAGCAGAGTCTAGTCCACAACATTCCATCAGATCCCTTAGTTATAGGACACTACGGGTTTGAGATGGCTGCTGCCATGGACAAAGGTGAAGCACTAGAAGGTTTTGTAAACCAGGCAGATCACCTTAGGCAGCAAACTCTGCTTTACATGTCAAGGATTCTAACAACTGGCCAAGCAGCTCAAGGCTTGCTGGCTATGGGGGAGTACTTCCATCGTCTTCGCACTCTTAGTTCTTTATGGACTGCTCATTCATGTGATCCTTCCTTTCCCACTCATCTCTCAAACTGA 1110 0.4342 MNSSSTQLVLAKRMGIYDPFHQVNMWGDTFKIDGSLNSIATPMFMTKSSMQNKSECTPHESREPSGDDQETNEKADSKVLRRQAQNREAARKCRLRKKAYVQQLETSRVKLMQLELEIEKAKKQSMYIRSAPDVSYMGSSGTINPGIALFELEYGQWIEELCRQNEELRNALQTRESDMQLHLLVESCLSHYSNLFRMKAEAAKADVFYLISGVWKASVERLFLWIGGSRPSQLLNIIVPQLEPLTDQQIVSINNLRLSSQQAEDALSLGLEKLQQSLVHNIPSDPLVIGHYGFEMAAAMDKGEALEGFVNQADHLRQQTLLYMSRILTTGQAAQGLLAMGEYFHRLRTLSSLWTAHSCDPSFPTHLSN* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02156 369 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 111 IPR004827 GO:0003700|GO:0006355
Phac8g02156 369 Coils Coil 158 178 - -
Phac8g02156 369 Gene3D - 77 130 - -
Phac8g02156 369 FunFam BZIP family transcription factor 77 126 - -
Phac8g02156 369 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Phac8g02156 369 Pfam bZIP transcription factor 77 126 IPR004827 GO:0003700|GO:0006355
Phac8g02156 369 SMART brlzneu 73 134 IPR004827 GO:0003700|GO:0006355
Phac8g02156 369 Pfam Seed dormancy control 166 239 IPR025422 GO:0006351|GO:0043565
Phac8g02156 369 PANTHER TRANSCRIPTION FACTOR TGA9 2 358 - -
Phac8g02156 369 MobiDBLite consensus disorder prediction 56 83 - -
Phac8g02156 369 MobiDBLite consensus disorder prediction 49 83 - -
Phac8g02156 369 SUPERFAMILY Leucine zipper domain 79 120 IPR046347 GO:0003700|GO:0006355
Phac8g02156 369 ProSiteProfiles DOG1 domain profile. 147 357 IPR025422 GO:0006351|GO:0043565
Phac8g02156 369 Coils Coil 97 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02156 Phac-Chr8 29172735 29177195 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02156 2 362 Calmodulin-binding Proteins AT1G77920 54.497 1.30e-135 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac8g02156 DOG1 1.9e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02156 K14431 - gmx:100775882 662.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g02156 8 29172735 29177195 Phac9g00776 9 5764060 5768032 PCT