Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02152 ATGCCTCCGCCGCAGCCTCGTCGCGTCGACCCCAAAATCTGGAGGGCATGCGCCGGCGCCGCTGTGCACATCCCGAAGCTGCATTCTAGGGTTTACTACTTCCCTCAGGGACACATGGAGCACGCCTCTCCCTCACATTCGCTCTCCCCTGCCTTCCGTTCCCCTCCCTTTGTTCCTTGCCACGTGTCCTCCCGTGATTTGCTCGCTGATCCATTCTCCGACGAGGTCTTCGCCAAGCTCCTCCTCACTCCCCTCCCTCACCCCTTCCACCACAACCAGAGCGACGACAGCAACAGCCAAAACGAGGACGAAGACGAGAGCGAGTGCCAAAACGGCGTCGTTTCGTTCTCCAAAATCCTCACGCCCTCCGACGCCAACAACGGCGGGGGCTTCTCCGTGCCGCGCTTCTGTGCGGACTCCGTCTTCCCTCCGCTAGATTTCCGCGCCGATCCTCCCGTCCAGCTTCTCTCCGTCACCGACGTCCACGGCGTCGCGTGGCGGTTCCGCCACATCTACCGTGGCACTCCACGTCGGCACCTCTTCACCACCGGCTGGAGCAAGTTCGTCAACCACAAGAAGCTCATCGCCGGAGATTCCGTTGTCTTCGTCAAGGACTCCGACGGGAACGTCTCAGTCGGGATCCGCCGTGCTACGCGCTTCGTCTCATCTTCCTCTCTTGTGGAGGCGGAGCAGCCGCCGGCGCAGGGGGAGGGGTTTACGCGGAGCGCAACCGGGAGAGTATCGCCGAAGGCGGTGGCGGCCGCGGCGGAGTGCGTGGCGCGGAACGCGCCGTTTGAGGTTGTGTATTATCCGAAGGCGGGTTTTGCGGATTTTGTGGTGAGTGCTGAGGTTGTGGAGGACGCGATGAAGTGCGCGTGGGTTGGTGGAATGAGAGTGAAGATAGGAATGGAGACTGAGGATTCTTCTAGGATGACGTGGTTTCAAGGGACGGTGACTTCTGCCTATGCCTCTGATAATGGACCTTGGCGCATGCTTCAGGTTAACTGGGATGAACCTGAAGTCTTGCAGAATGCAAAGCGAGTCAGTCCTTGGCAGGTTGAACTTGTTTCCCCCTCACTAGCTCTTCATCCCGCCTTTTCCCCTTCAAAAAGGTTTAGAGCTGACCAGGGTTCTGGACTGTTAAGTGATAGGGAGGGAGACCCCTTCTTTCCTATGACAGGTTTCCCTAACTCAACAATGGGAAACATGGATAAAAGATTGTTGAGTTATGATACTTTTCCTGCAGGCATGCAGGGAGCCAGGCATGATCTATTTTCTGCATCAAGTTTTTCCAACTTTTTAAACGATAACTCTTATATGTACATGGGTAGCACTTCCTTTGGGAACAATACTGTTCAAAGTTTGGGAATTGTTTCAACAGAGCTAAACATGAGCAGTTCTCAATCAGATGACCTGTCACCACATAGCCAGAGTAGTTTACATTCCTTTGACACAGAGTTTACTGGGACCCGGCAGTGCAACACCAAAGTTGGTTCTGGTTCAATCCTGCTATTTGGTAAGATCATACAGCCTGCTGAAACTCATTTGCATGATGCTGCTGATTACACAGAACGTGATGGCAGCAGGGGCAACAAAGAAACTGAAGACAGTTGA 1614 0.5458 MPPPQPRRVDPKIWRACAGAAVHIPKLHSRVYYFPQGHMEHASPSHSLSPAFRSPPFVPCHVSSRDLLADPFSDEVFAKLLLTPLPHPFHHNQSDDSNSQNEDEDESECQNGVVSFSKILTPSDANNGGGFSVPRFCADSVFPPLDFRADPPVQLLSVTDVHGVAWRFRHIYRGTPRRHLFTTGWSKFVNHKKLIAGDSVVFVKDSDGNVSVGIRRATRFVSSSSLVEAEQPPAQGEGFTRSATGRVSPKAVAAAAECVARNAPFEVVYYPKAGFADFVVSAEVVEDAMKCAWVGGMRVKIGMETEDSSRMTWFQGTVTSAYASDNGPWRMLQVNWDEPEVLQNAKRVSPWQVELVSPSLALHPAFSPSKRFRADQGSGLLSDREGDPFFPMTGFPNSTMGNMDKRLLSYDTFPAGMQGARHDLFSASSFSNFLNDNSYMYMGSTSFGNNTVQSLGIVSTELNMSSSQSDDLSPHSQSSLHSFDTEFTGTRQCNTKVGSGSILLFGKIIQPAETHLHDAADYTERDGSRGNKETEDS* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02152 537 SMART B3_2 116 218 IPR003340 GO:0003677
Phac8g02152 537 Gene3D - 113 218 IPR015300 -
Phac8g02152 537 MobiDBLite consensus disorder prediction 516 537 - -
Phac8g02152 537 Gene3D - 294 360 - -
Phac8g02152 537 MobiDBLite consensus disorder prediction 517 537 - -
Phac8g02152 537 MobiDBLite consensus disorder prediction 88 108 - -
Phac8g02152 537 CDD B3_DNA 115 216 IPR003340 GO:0003677
Phac8g02152 537 SUPERFAMILY DNA-binding pseudobarrel domain 110 223 IPR015300 -
Phac8g02152 537 Pfam B3 DNA binding domain 116 217 IPR003340 GO:0003677
Phac8g02152 537 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 8 510 IPR044835 GO:0003677|GO:0006355|GO:0009725
Phac8g02152 537 FunFam Auxin response factor 114 218 - -
Phac8g02152 537 ProSiteProfiles B3 DNA-binding domain profile. 116 218 IPR003340 GO:0003677
Phac8g02152 537 Pfam Auxin response factor 255 330 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02152 Phac-Chr8 29058320 29062664 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02152 7 535 B3 DNA Binding Superfamily AT1G77850 48.566 1.76e-162 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Phac8g02152 B3 2e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02152 - - gmx:100804933 833.558