Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02143 ATGAATCACCTACCTCGGCTATTCGGCAATAGAAAGAAGCCCCCGACCATGGACCCTAAGAAGAGCAAGACGCGAGGCAAGAAGCAGCAGCCCAAGCTCGAGCGCCGCAACGCCGCCAAGCACTTCGAATACGACGCCGGATCCTCCTCCTCGTTGCGGGGTGACTCCGCCTCCGTCTCGACGTCGTCTTCCTCGTCGTCTTCGCTCTACACGCGCTCCATGGACTTCTACGACCGCAGGAGCTTCCGAATCGAGGGCGTGGAGGGCGAATTCGACCGGATTTGTCGCAGCCTCGGCCTCTCCGGTCCGGAGGACTTCTCCATTCCGGCCTCCACCTGGGAGGCTATGAAGCTCCGCTCCTCCTCCGACATCCCGTCGCGCCGGAACCACGACGGGAAGGCGTTAGACGAGGAGGCGAAGGTGAAGGAGGAAATTGAAGCGGTTGCGAACGAGGGTGGGGCCAGGGTTTTGGATGAGTGTGTTGTCCCTGCTGAGAGTAGTAATTGCTGCTCAGCTGGCGGCGGCGGAATTAAGGGTTTTCGGCCTGCGATGCTGAAGCCGCCGCCGGGTGTTAGGGTTTCGGTGGTGGACGAAACGTGTTCCACGTGGGATTTGTTGCGGGATTTTGCGCCGAAAGGGGAGGGAGAGAAGGAGAGTTACGTGGAGTTGGGTAGTTCTGATGAAGATGTAGACGAGGACCGAGAAGAAAAGGAGGATGAGGATGAGAATGAGGAAGAAGGGGAAGTTGGTGGAGTGAGGGTGGAGAGAGAAGAGGAGGAAAACGCGGCGAGGATTGCGGATATTGTGGACGAGTTTTCAGGGTTTTCTACTTCGAATGAAGATGATTCTTCTAGCACTACCACGGGTCCTAATTCTAATAATATATCTCCTAATGGGAGAATCAAGCGTGTGATTTCCGCAGGTAACTGGCAGAAGGGTGATCTTTTGGGGCGTGGCTCGTTTGGCTATGTCTATGAAGGGATTTCTGAAGATGGGTTCTTTTTTGCTGTAAAACAAGTTTCACTACTTGATCAAGGGAATCAGGCAAGGCAAAGTGTCTATCAACTGGAACAGGAAATTGCACTTTTGAGTCAATTTGAACACGAGAATATAGTTCAATACTTTGGCACTGAAATGGATGCATCAAATCTGTATATCTTTATTGAGCTTGTAACTAAAGGTTCTCTTAGAGACCTCTACCAGAGATATACACTTCGAGATTCTCAAGTATCTGCATATACAAGGCAGATTTTGCATGGTTTAAAGTATCTCCATGATCGAAACATCGTTCACAGGGACATTAAATGTGCAAATATATTGGTGGATGCAAATGGATCTGTTAAGCTTTCAGATTTTGGATTGGCAAAGGCAATCAAATTAAATGATGTTAAATCATGCAAGGGAACAGCATTCTGGATGGCCCCAGAGGATAGGCTTTTGGCAGAGGATTTCTTCTCTCTTGAACACTTGCTCTATAAGGGGAGGCTATATAGTCTTTGTACAGTTCTCTCGTATTTCTCTTTGTTCAACAATACAAGTTACACATTCTATCCATGTTTTATCGGTCTGACTTGCCCACAACTTCAGCCTCAAGGACAGGGCTGCCTTTATAGCAGATGA 1620 0.4926 MNHLPRLFGNRKKPPTMDPKKSKTRGKKQQPKLERRNAAKHFEYDAGSSSSLRGDSASVSTSSSSSSSLYTRSMDFYDRRSFRIEGVEGEFDRICRSLGLSGPEDFSIPASTWEAMKLRSSSDIPSRRNHDGKALDEEAKVKEEIEAVANEGGARVLDECVVPAESSNCCSAGGGGIKGFRPAMLKPPPGVRVSVVDETCSTWDLLRDFAPKGEGEKESYVELGSSDEDVDEDREEKEDEDENEEEGEVGGVRVEREEEENAARIADIVDEFSGFSTSNEDDSSSTTTGPNSNNISPNGRIKRVISAGNWQKGDLLGRGSFGYVYEGISEDGFFFAVKQVSLLDQGNQARQSVYQLEQEIALLSQFEHENIVQYFGTEMDASNLYIFIELVTKGSLRDLYQRYTLRDSQVSAYTRQILHGLKYLHDRNIVHRDIKCANILVDANGSVKLSDFGLAKAIKLNDVKSCKGTAFWMAPEDRLLAEDFFSLEHLLYKGRLYSLCTVLSYFSLFNNTSYTFYPCFIGLTCPQLQPQGQGCLYSR* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02143 539 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 38 487 - -
Phac8g02143 539 SUPERFAMILY Protein kinase-like (PK-like) 307 477 IPR011009 -
Phac8g02143 539 ProSiteProfiles Protein kinase domain profile. 310 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02143 539 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Phac8g02143 539 MobiDBLite consensus disorder prediction 225 248 - -
Phac8g02143 539 MobiDBLite consensus disorder prediction 249 266 - -
Phac8g02143 539 Pfam Protein kinase domain 311 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02143 539 MobiDBLite consensus disorder prediction 214 299 - -
Phac8g02143 539 MobiDBLite consensus disorder prediction 49 70 - -
Phac8g02143 539 Gene3D Transferase(Phosphotransferase) domain 1 307 493 - -
Phac8g02143 539 SMART serkin_6 310 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02143 539 MobiDBLite consensus disorder prediction 1 70 - -
Phac8g02143 539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Phac8g02143 539 MobiDBLite consensus disorder prediction 272 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02143 Phac-Chr8 28857081 28868046 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02143 32 476 MAP Kinase Kinase Kinase AT4G08500 48.200 1.01e-119 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phac8g02143 Pkinase 1.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02143 K13414 - gmx:100804388 664.84