Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02142 ATGAATCACCTACCTCGGCTATTCGGCAATAGAAAGAAGCCCCCGACCATGGACCCTAAGAAGAGCAAGACGCGAGGCAAGAAGCAGCAGCCCAAGCTCGAGCGCCGCAACGCCGCCAAGCACTTCGAATACGACGCCGGATCCTCCTCCTCGTTGCGGGGTGACTCCGCCTCCGTCTCGACGTCGTCTTCCTCGTCGTCTTCGCTCTACACGCGCTCCATGGACTTCTACGACCGCAGGAGCTTCCGAATCGAGGGCGTGGAGGGCGAATTCGACCGGATTTGTCGCAGCCTCGGCCTCTCCGGTCCGGAGGACTTCTCCATTCCGGCCTCCACCTGGGAGGCTATGAAGCTCCGCTCCTCCTCCGACATCCCGTCGCGCCGGAACCACGACGGGAAGGCGTTAGACGAGGAGGCGAAGGTGAAGGAGGAAATTGAAGCGGTTGCGAACGAGGGTGGGGCCAGGGTTTTGGATGAGTGTGTTGTCCCTGCTGAGAGTAGTAATTGCTGCTCAGCTGGCGGCGGCGGAATTAAGGGTTTTCGGCCTGCGATGCTGAAGCCGCCGCCGGGTGTTAGGGTTTCGGTGGTGGACGAAACGTGTTCCACGTGGGATTTGTTGCGGGATTTTGCGCCGAAAGGGGAGGGAGAGAAGGAGAGTTACGTGGAGTTGGGTAGTTCTGATGAAGATGTAGACGAGGACCGAGAAGAAAAGGAGGATGAGGATGAGAATGAGGAAGAAGGGGAAGTTGGTGGAGTGAGGGTGGAGAGAGAAGAGGAGGAAAACGCGGCGAGGATTGCGGATATTGTGGACGAGTTTTCAGGGTTTTCTACTTCGAATGAAGATGATTCTTCTAGCACTACCACGGGTCCTAATTCTAATAATATATCTCCTAATGGGAGAATCAAGCGTGTGATTTCCGCAGGTAACTGGCAGAAGGGTGATCTTTTGGGGCGTGGCTCGTTTGGCTATGTCTATGAAGGGATTTCTGAAGATGGGTTCTTTTTTGCTGTAAAACAAGTTTCACTACTTGATCAAGGGAATCAGGCAAGGCAAAGTGTCTATCAACTGGAACAGGAAATTGCACTTTTGAGTCAATTTGAACACGAGAATATAGTTCAATACTTTGGCACTGAAATGGATGCATCAAATCTGTATATCTTTATTGAGCTTGTAACTAAAGGTTCTCTTAGAGACCTCTACCAGAGATATACACTTCGAGATTCTCAAGTATCTGCATATACAAGGCAGATTTTGCATGGTTTAAAGTATCTCCATGATCGAAACATCGTTCACAGGGACATTAAATGTGCAAATATATTGGTGGATGCAAATGGATCTGTTAAGCTTTCAGATTTTGGATTGGCAAAGGCAATCAAATTAAATGATGTTAAATCATGCAAGGGAACAGCATTCTGGATGGCCCCAGAGGTTGTAAGAGGTAAACAGAAAGGTTATGGGCTTCCAGCCGATATATGGAGTTTGGGATGTACTGTGTTAGAGATGTTAACTGGCCAATTTCCATACTCTCACTTAGAATGTATGCAGGCATTGTTTAGAATTGGAAGAGGCGAGCTCCCCATTGTGCCAGAATCCCTTTCAAGAGATGCACAGGATTTTATCCTGCAGTGTCTCAAAGTTAATCCAGATGAACGTTCCACTGCTGCTAAACTCTTAAATCATACCTTTGTCCAAAGGCCACTACTTTCCCAGTCCTCTGGTTCTGCATCTCCTTATATTCGAAGGGGTTAA 1749 0.4894 MNHLPRLFGNRKKPPTMDPKKSKTRGKKQQPKLERRNAAKHFEYDAGSSSSLRGDSASVSTSSSSSSSLYTRSMDFYDRRSFRIEGVEGEFDRICRSLGLSGPEDFSIPASTWEAMKLRSSSDIPSRRNHDGKALDEEAKVKEEIEAVANEGGARVLDECVVPAESSNCCSAGGGGIKGFRPAMLKPPPGVRVSVVDETCSTWDLLRDFAPKGEGEKESYVELGSSDEDVDEDREEKEDEDENEEEGEVGGVRVEREEEENAARIADIVDEFSGFSTSNEDDSSSTTTGPNSNNISPNGRIKRVISAGNWQKGDLLGRGSFGYVYEGISEDGFFFAVKQVSLLDQGNQARQSVYQLEQEIALLSQFEHENIVQYFGTEMDASNLYIFIELVTKGSLRDLYQRYTLRDSQVSAYTRQILHGLKYLHDRNIVHRDIKCANILVDANGSVKLSDFGLAKAIKLNDVKSCKGTAFWMAPEVVRGKQKGYGLPADIWSLGCTVLEMLTGQFPYSHLECMQALFRIGRGELPIVPESLSRDAQDFILQCLKVNPDERSTAAKLLNHTFVQRPLLSQSSGSASPYIRRG* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02142 582 Pfam Protein kinase domain 311 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02142 582 ProSiteProfiles Protein kinase domain profile. 310 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02142 582 Gene3D Transferase(Phosphotransferase) domain 1 307 577 - -
Phac8g02142 582 SUPERFAMILY Protein kinase-like (PK-like) 298 569 IPR011009 -
Phac8g02142 582 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 38 577 - -
Phac8g02142 582 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Phac8g02142 582 MobiDBLite consensus disorder prediction 225 248 - -
Phac8g02142 582 FunFam Mitogen-activated protein kinase 1, putative, expressed 308 576 - -
Phac8g02142 582 SMART serkin_6 310 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02142 582 MobiDBLite consensus disorder prediction 249 266 - -
Phac8g02142 582 MobiDBLite consensus disorder prediction 214 299 - -
Phac8g02142 582 MobiDBLite consensus disorder prediction 49 70 - -
Phac8g02142 582 MobiDBLite consensus disorder prediction 1 70 - -
Phac8g02142 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Phac8g02142 582 MobiDBLite consensus disorder prediction 272 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02142 Phac-Chr8 28849988 28868046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02142 32 567 MAP Kinase Kinase Kinase AT4G08500 51.858 3.20e-170 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phac8g02142 Pkinase 1.7e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02142 K13414 - gmx:100804388 852.047