Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02118 ATGGTGCACTTAAAAACTCAAGGAAAAGAGCACGGAACGACGAGCCCAAAAGAAGAAGAAAGTGAAAGAGAAAACGGTACAACTAAATGTAAATCCCACTTTTCCCTAACTTTAATTTCACCATTGTACCAAAGATTAAACCTTTTCAAAATATTTCGGAAGCATAGCGTTACTGTTCTTCAGCGGTGGAAAGGAAGAACATCACCACGCACACGACGAAAGTCCCATCCGGGGTTAGAAATGCGACATTCCATGGAAGACAACGCTAACCTCTCTCTTCCTCGCGACTCTTCCCCTTCCTCTCCGGAATTCTTCAGACAAGTCCAAGCTGCTCTCAAGCGCCATCGTCCTCTCGCTTCAACGCAATCGCATACCTTGAGGCCAAAGCGCTCCATGGTGGCGCACCGAAACATCGCGAACAAGTCCGAAGAGGAACCTCCGTCGATTTCGGACACGTGCACCGGTGAAGGTTGCAAGAACGAACCCTCTCTGCCGGTGGAATCTCAGAGTGTTGGTGCTCACAAGAAGGTTCGGTTTTCAACTGAGAGCAACAATGGCACTTCGCAGCCACAGGATGGGGCATCAATTGGATTCAATCAACATGTTAAACACCACAATATGCTGCAGGCAGAGTCTGAGATTAGTTTGTTATCTGAGGGAGGCAAGAGTTCTCTGCTTCCAAAGAGAACAATAGTTACTCAGGATCATCTGCAGCAATTCAAAAACTTTTTGAGTCAACCAGCTACACAATCATCCGCAGTGGGATTGCCATGTCCTACAACTACATCAGTCCATTCAACTTCAGCTCCAATGTTGAATTCTATAACTCACTGTTCTAATTCCTGTATGGATAGTGACTCACATGTGGCTGCAAAACCTTATGATAACCTGAATGTCAATCTTCATCCAGTAACACAAAGGGTTGTTAAATCACCATATGATTCTCTGAAGGACACCAATAGAATGTTAATTGATGCAGAGTTGACATTTAAGCAGAGTGATCCATCTAAGGAGCAACAAGGATGTTTATTAAAGGAAACTAGTATTTCAAAATATACTTCTCTTTGTGATGACATGTTAAGTAAAGGGGAAGAGTCTGCAGCTGTTACCAACATACTGCCTCAGGCTCTGACTTCATCTTCAAATACGAATCTGGAATCTTCTAGCTTAGAAAAACAAGAAAAAAATGCAAGTTGTAAAGGACCTTCGGTCACACGGAAGAGGACCTATGACCCTGAGTTGTTTTTTAAAGTCAATGGCAAGCTTTATCAAAGGCTTGGCAAGATAGGCAGTGGTGGAAGCAGTGAGGTGCACAAAGTGATTTCATCAGACTGTACTATCTATGCACTTAAAAAAATAAAACTAAAGGGTCATGATTATGCCACTGCGTACAGCTTTTGTCAGGAGATCGAGTATCTAAATAGGCTGAAAGGAAAGAATAATATTATCCAGCTTATGGATTATGAGGTGACTGACAAGGCTTTGTTTGAGGGAGTCATAAATGGCTCCTTCAGTAGTAAAGGTGGTAGAGTCAAGGATGATGTATACATATACATGGTGCTTGAATATGGGGAAATTGATTTGGCTCATATGTTGTCTCAAAAGTGGAAGGAACTAGATGGGAACAACCAGACTGTAGATGCGAATTGGCTTCGATTTTATTGGCAGCAAATTCTTCAAGCTGTCAACACAATTCATGAAGAACGTATTGTGCATTCTGACTTGAAGCCAGCTAACTTCCTCCTTGTCAAAGGTTCATTAAAACTGATTGATTTTGGAATAGCCAAAGCAATAATGAGTGATACGACAAACATCCAACGTGATTCACAGGAGCATTGGAGACGTCCTCGACCACCACGTCCTCGACCACCACGTCCTTCTTTATTGCCACGACCTCCCCTTTCACGAGTAGATACCATGGCTGAAGCTTCAACATGA 1938 0.4278 MVHLKTQGKEHGTTSPKEEESERENGTTKCKSHFSLTLISPLYQRLNLFKIFRKHSVTVLQRWKGRTSPRTRRKSHPGLEMRHSMEDNANLSLPRDSSPSSPEFFRQVQAALKRHRPLASTQSHTLRPKRSMVAHRNIANKSEEEPPSISDTCTGEGCKNEPSLPVESQSVGAHKKVRFSTESNNGTSQPQDGASIGFNQHVKHHNMLQAESEISLLSEGGKSSLLPKRTIVTQDHLQQFKNFLSQPATQSSAVGLPCPTTTSVHSTSAPMLNSITHCSNSCMDSDSHVAAKPYDNLNVNLHPVTQRVVKSPYDSLKDTNRMLIDAELTFKQSDPSKEQQGCLLKETSISKYTSLCDDMLSKGEESAAVTNILPQALTSSSNTNLESSSLEKQEKNASCKGPSVTRKRTYDPELFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCTIYALKKIKLKGHDYATAYSFCQEIEYLNRLKGKNNIIQLMDYEVTDKALFEGVINGSFSSKGGRVKDDVYIYMVLEYGEIDLAHMLSQKWKELDGNNQTVDANWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQEHWRRPRPPRPRPPRPSLLPRPPLSRVDTMAEAST* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02118 645 ProSiteProfiles Protein kinase domain profile. 423 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02118 645 MobiDBLite consensus disorder prediction 605 645 - -
Phac8g02118 645 MobiDBLite consensus disorder prediction 380 403 - -
Phac8g02118 645 MobiDBLite consensus disorder prediction 380 404 - -
Phac8g02118 645 MobiDBLite consensus disorder prediction 143 167 - -
Phac8g02118 645 Gene3D Phosphorylase Kinase; domain 1 416 500 - -
Phac8g02118 645 SUPERFAMILY Protein kinase-like (PK-like) 417 602 IPR011009 -
Phac8g02118 645 Pfam Protein kinase domain 423 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02118 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 570 582 IPR008271 GO:0004672|GO:0006468
Phac8g02118 645 MobiDBLite consensus disorder prediction 62 102 - -
Phac8g02118 645 ProSitePatterns Protein kinases ATP-binding region signature. 429 451 IPR017441 GO:0005524
Phac8g02118 645 Gene3D Transferase(Phosphotransferase) domain 1 519 638 - -
Phac8g02118 645 MobiDBLite consensus disorder prediction 1 29 - -
Phac8g02118 645 FunFam Dual specificity protein kinase TTK 416 525 - -
Phac8g02118 645 SMART serkin_6 423 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02118 645 PANTHER MIXED LINEAGE PROTEIN KINASE 35 610 - -
Phac8g02118 645 MobiDBLite consensus disorder prediction 141 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02118 Phac-Chr8 28332828 28349984 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02118 423 615 Core Cell Cycle Gene Families AT3G48750 29.293 4.83e-13 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Phac8g02118 Pkinase 2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02118 K08866 - gmx:100795003 842.802