Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02116 ATGGTGCACTTAAAAACTCAAGGAAAAGAGCACGGAACGACGAGCCCAAAAGAAGAAGAAAGTGAAAGAGAAAACGGTACAACTAAATGTAAATCCCACTTTTCCCTAACTTTAATTTCACCATTGTACCAAAGATTAAACCTTTTCAAAATATTTCGGAAGCATAGCGTTACTGTTCTTCAGCGGTGGAAAGGAAGAACATCACCACGCACACGACGAAAGTCCCATCCGGGGTTAGAAATGCGACATTCCATGGAAGACAACGCTAACCTCTCTCTTCCTCGCGACTCTTCCCCTTCCTCTCCGGAATTCTTCAGACAAGTCCAAGCTGCTCTCAAGCGCCATCGTCCTCTCGCTTCAACGCAATCGCATACCTTGAGGCCAAAGCGCTCCATGGTGGCGCACCGAAACATCGCGAACAAGTCCGAAGAGGAACCTCCGTCGATTTCGGACACGTGCACCGGTGAAGGTTGCAAGAACGAACCCTCTCTGCCGGTGGAATCTCAGAGTGTTGGTGCTCACAAGAAGGTTCGGTTTTCAACTGAGAGCAACAATGGCACTTCGCAGCCACAGGATGGGGCATCAATTGGATTCAATCAACATGTTAAACACCACAATATGCTGCAGGCAGAGTCTGAGATTAGTTTGTTATCTGAGGGAGGCAAGAGTTCTCTGCTTCCAAAGAGAACAATAGTTACTCAGGATCATCTGCAGCAATTCAAAAACTTTTTGAGTCAACCAGCTACACAATCATCCGCAGTGGGATTGCCATGTCCTACAACTACATCAGTCCATTCAACTTCAGCTCCAATGTTGAATTCTATAACTCACTGTTCTAATTCCTGTATGGATAGTGACTCACATGTGGCTGCAAAACCTTATGATAACCTGAATGTCAATCTTCATCCAGTAACACAAAGGGTTGTTAAATCACCATATGATTCTCTGAAGGACACCAATAGAATGTTAATTGATGCAGAGTTGACATTTAAGCAGAGTGATCCATCTAAGGAGCAACAAGGATGTTTATTAAAGGAAACTAGTATTTCAAAATATACTTCTCTTTGTGATGACATGTTAAGTAAAGGGGAAGAGTCTGCAGCTGTTACCAACATACTGCCTCAGGCTCTGACTTCATCTTCAAATACGAATCTGGAATCTTCTAGCTTAGAAAAACAAGAAAAAAATGCAAGTTGTAAAGGACCTTCGGTCACACGGAAGAGGACCTATGACCCTGAGTTGTTTTTTAAAGTCAATGGCAAGCTTTATCAAAGGCTTGGCAAGATAGGCAGTGGTGGAAGCAGTGAGGTGCACAAAGTGATTTCATCAGACTGTACTATCTATGCACTTAAAAAAATAAAACTAAAGGGTCATGATTATGCCACTGCGTACAGCTTTTGTCAGGAGATCGAGTATCTAAATAGGCTGAAAGGAAAGAATAATATTATCCAGCTTATGGATTATGAGGTGACTGACAAGGCTTTGTTTGAGGGAGTCATAAATGGCTCCTTCAGTAGTAAAGGTGGTAGAGTCAAGGATGATGTATACATATACATGGTGCTTGAATATGGGGAAATTGATTTGGCTCATATGTTGTCTCAAAAGTGGAAGGAACTAGATGGGAACAACCAGACTGTAGATGCGAATTGGCTTCGATTTTATTGGCAGCAAATTCTTCAAGCTGTCAACACAATTCATGAAGAACGTATTGTGCATTCTGACTTGAAGCCAGCTAACTTCCTCCTTGTCAAAGGTTCATTAAAACTGATTGATTTTGGAATAGCCAAAGCAATAATGAGTGATACGACAAACATCCAACGTGATTCACAGGTATTTCATTCTTGTACCATGGTTATCAATCTCAAGTTGCAGCTTGTAGCAGGAAGCAGGATGACTGCAGTTCTAAATATAGTACCACAAATAATTTGTACTACACCGATCAGTCTAGGAGCATTTAGGTTACTGTATTGA 1971 0.4181 MVHLKTQGKEHGTTSPKEEESERENGTTKCKSHFSLTLISPLYQRLNLFKIFRKHSVTVLQRWKGRTSPRTRRKSHPGLEMRHSMEDNANLSLPRDSSPSSPEFFRQVQAALKRHRPLASTQSHTLRPKRSMVAHRNIANKSEEEPPSISDTCTGEGCKNEPSLPVESQSVGAHKKVRFSTESNNGTSQPQDGASIGFNQHVKHHNMLQAESEISLLSEGGKSSLLPKRTIVTQDHLQQFKNFLSQPATQSSAVGLPCPTTTSVHSTSAPMLNSITHCSNSCMDSDSHVAAKPYDNLNVNLHPVTQRVVKSPYDSLKDTNRMLIDAELTFKQSDPSKEQQGCLLKETSISKYTSLCDDMLSKGEESAAVTNILPQALTSSSNTNLESSSLEKQEKNASCKGPSVTRKRTYDPELFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCTIYALKKIKLKGHDYATAYSFCQEIEYLNRLKGKNNIIQLMDYEVTDKALFEGVINGSFSSKGGRVKDDVYIYMVLEYGEIDLAHMLSQKWKELDGNNQTVDANWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVFHSCTMVINLKLQLVAGSRMTAVLNIVPQIICTTPISLGAFRLLY* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02116 656 ProSitePatterns Protein kinases ATP-binding region signature. 429 451 IPR017441 GO:0005524
Phac8g02116 656 SMART serkin_6 423 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02116 656 MobiDBLite consensus disorder prediction 1 29 - -
Phac8g02116 656 PANTHER MIXED LINEAGE PROTEIN KINASE 35 611 - -
Phac8g02116 656 SUPERFAMILY Protein kinase-like (PK-like) 417 602 IPR011009 -
Phac8g02116 656 Pfam Protein kinase domain 423 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02116 656 MobiDBLite consensus disorder prediction 380 403 - -
Phac8g02116 656 Gene3D Transferase(Phosphotransferase) domain 1 519 631 - -
Phac8g02116 656 MobiDBLite consensus disorder prediction 380 404 - -
Phac8g02116 656 FunFam Dual specificity protein kinase TTK 416 525 - -
Phac8g02116 656 MobiDBLite consensus disorder prediction 143 167 - -
Phac8g02116 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 570 582 IPR008271 GO:0004672|GO:0006468
Phac8g02116 656 MobiDBLite consensus disorder prediction 62 102 - -
Phac8g02116 656 Gene3D Phosphorylase Kinase; domain 1 416 500 - -
Phac8g02116 656 ProSiteProfiles Protein kinase domain profile. 423 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g02116 656 MobiDBLite consensus disorder prediction 141 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02116 Phac-Chr8 28332828 28339339 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02116 423 598 Core Cell Cycle Gene Families AT3G48750 30.939 5.47e-13 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Phac8g02116 Pkinase 5.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02116 K08866 - gmx:100795003 844.343