Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02096 ATGAGTGTTTGTTCTTACGCTCCCTCAGCATCTTATAATTATAAACCTCCCACTAATCAAGTGTACGACAGCTCAGCTCTCTACTCACTGTTAGTGTACAATTACTCTCTCATGGACGACCCTGATTTCCTCGACTTCTCCAATCGCAGCATCACCACCAGTGCTTCCTCCGAGGAAGACTGGACCAACCTGTGGTCCCCCGTCGTCGATTGGGGATCCCTTGCCGCCGGCGAAGACAATTTTCAAACCCTATTTGACTCCATCGTCGATGAAGACGACGTCGTTCTGACCCCAGATCAAACCACAGCCCAAGACTCCGACTTAAGTGGTCATGATGAGAAGGGCCTCCGCCTGGTGCACCTCCTCATGGCGGCGGCGGAGGCCCTAACCACCGGCACCGAGAGCCACCACCTGGCTCGAGTGATATTGGTTCGGCTCAATGAGTTGGTGTCCCCAACCCACGGCACCAACATCGAAAGACTCGCGGCGCACTTTAGCAGCGCACTCCAAAATCTGCTAGACGGCGCCGGGAGTTCCCACACCATAACCAACAACACCCCCAACCCCACGGACACGCTCACCGCGTTCCACCTTCTCCAGGACATGTCCCCTTACGTCAAGTTCGCTCACTTCACCGCCAACCAGGCCATCTTAGAGGCCGTGGCCCACGAAAAACGGGTCCACATAGTCGACTTCGACGTCACCGAAGGGGCCCAATGGGCCTCCCTAATGCAGTCCCTTTCGTCAAGAAGCACCGGCCCACCAGGCCCACACCTTCGCATCACGGCATTGTCCAGAGGCTCGGCCTCTGGACGGAGATCCATTGCCACCGTTCAGGAAACCGGACGGAGGCTAACGGCGTTCGCGGCTTCTGTGGCCCAACCGTTTTCTTTTCACCAGTGTCGGTTGGACCCTGGCGAAACGTTTCGACCTTCATTACTGAAGCTGATTAGCGGCGAGGCCTTGGTGTTTAACTGCATGCTGCACTTGCCGCACTTGAGCTTCAGAGCCTCAGGTTCGGTTGCTTCGTTTTTAAAAGGTGCCAAGGAGTTGAACCCGAGGGTGGTGATGGTTGTAGAGGAAGAGGTGGCGCGTGGTGGAGATGCGGGCTTTGTCGGCCTGTTTATGGATTCTGTGCAGCACTACTCCGCCGTGTTTGATTCGCTGGAGGTTGGGTTTCCGATGCAGAAATGGGCCCGGGCTTTGGTGGAGCGCGTGTTTTTGGGCCCAAGAATTGCAAATTCTGTAGGCCTTATGTACCAGAGTGGAGGAGAGGAGAGAGGGTCGTGGGAGGAGTGGTTAGGTGCGGCGGGGTTTAGGGGAGTTCCCGTAAGCTTCGCTAATCATTGCCAAGCGAATCTGTTACTAGGACTGTTTAACGATGGATATAGAGTGGAGGAGTTGGGAAACAATAAATTGGTGTTGGGTTGGAAATCACGCCGTTTAATTTCAGCCTCCGTTTGGACTTCAAACTCTTGA 1479 0.5483 MSVCSYAPSASYNYKPPTNQVYDSSALYSLLVYNYSLMDDPDFLDFSNRSITTSASSEEDWTNLWSPVVDWGSLAAGEDNFQTLFDSIVDEDDVVLTPDQTTAQDSDLSGHDEKGLRLVHLLMAAAEALTTGTESHHLARVILVRLNELVSPTHGTNIERLAAHFSSALQNLLDGAGSSHTITNNTPNPTDTLTAFHLLQDMSPYVKFAHFTANQAILEAVAHEKRVHIVDFDVTEGAQWASLMQSLSSRSTGPPGPHLRITALSRGSASGRRSIATVQETGRRLTAFAASVAQPFSFHQCRLDPGETFRPSLLKLISGEALVFNCMLHLPHLSFRASGSVASFLKGAKELNPRVVMVVEEEVARGGDAGFVGLFMDSVQHYSAVFDSLEVGFPMQKWARALVERVFLGPRIANSVGLMYQSGGEERGSWEEWLGAAGFRGVPVSFANHCQANLLLGLFNDGYRVEELGNNKLVLGWKSRRLISASVWTSNS* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02096 492 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 100 485 IPR005202 -
Phac8g02096 492 ProSiteProfiles GRAS family profile. 109 489 IPR005202 -
Phac8g02096 492 Pfam GRAS domain family 118 489 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02096 Phac-Chr8 28040203 28041901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02096 98 491 GRAS Transcription Factor Family AT5G41920 34.406 1.08e-54 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac8g02096 GRAS 7.1e-101 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02096 - - pvu:PHAVU_008G165200g 875.544