Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02094 ATGCCACTGAACCGTTGCCAAAGCAAAACCACAAGGTGGTATCAGCTATGCTTTGTTCCCACTAGTTCAGATAGTTCAGATGACTCGGACGTAGAATCTGTAGTCCTTACTCCTAGTACTCCAACTCCAACTAGTACCACATGGCAAGAACTTTCTCCTCCACCACCACCAAATCCTCAACCTCAAGTTGATTGGCGTTTTCCACCACCACCGCCGCCGCCACATTTTGTACAGCACAGCCGGGCTTGGGATAGATTTTTAAACATAGAGGTACAGCAAGATAGATCTCAATCTCCCAGTCTAAGTCATGTGTTTGAAGGTGATAAAAGTGGGTGCTCAACGAATGCCATGAATGGCCTTAGCAGGGAAAGAGTATCAGAGATGGATAAAGTCTTTCTCTGTCCCATTTGCATGGATGACTTTAAAGTGTGTGATCAAGCATACCGGTTACCCTGCAACCACACCTTTTGTTCTGAATGCATTCTTCGTTGGCTTAACAGCAGCAAAACATGTCCAGTTTGCAGGCTTCAATTGAATGGTTATAATTTTGATAGCATAAATGATAATAATGATTTCAACTCACAACTTGAATTTCTATTATTGTCACCGTCACCACCATCATCAATAGTACACAATGATTCACCTCAGCGCTCGGACTACTTTGACGAATCTTCTCTCTACCGTACACCAGGTATAGAGAATAGTGCAAGTGGTAACTCAGATGAAGCTGATTATGATAGTGCATCTGATGATTTTGGTGATTCTCAAGAAGATGGTGCTTCTCATACTGCTTCCGATACTCTAATTTAA 810 0.4247 MPLNRCQSKTTRWYQLCFVPTSSDSSDDSDVESVVLTPSTPTPTSTTWQELSPPPPPNPQPQVDWRFPPPPPPPHFVQHSRAWDRFLNIEVQQDRSQSPSLSHVFEGDKSGCSTNAMNGLSRERVSEMDKVFLCPICMDDFKVCDQAYRLPCNHTFCSECILRWLNSSKTCPVCRLQLNGYNFDSINDNNDFNSQLEFLLLSPSPPSSIVHNDSPQRSDYFDESSLYRTPGIENSASGNSDEADYDSASDDFGDSQEDGASHTASDTLI* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02094 269 ProSiteProfiles Zinc finger RING-type profile. 134 175 IPR001841 -
Phac8g02094 269 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 209 IPR013083 -
Phac8g02094 269 MobiDBLite consensus disorder prediction 48 71 - -
Phac8g02094 269 MobiDBLite consensus disorder prediction 228 243 - -
Phac8g02094 269 MobiDBLite consensus disorder prediction 21 47 - -
Phac8g02094 269 ProSitePatterns Zinc finger RING-type signature. 152 161 IPR017907 -
Phac8g02094 269 MobiDBLite consensus disorder prediction 228 269 - -
Phac8g02094 269 Pfam Ring finger domain 134 175 IPR001841 -
Phac8g02094 269 SMART ring_2 134 174 IPR001841 -
Phac8g02094 269 MobiDBLite consensus disorder prediction 21 71 - -
Phac8g02094 269 PANTHER RING FINGER PROTEIN 141-RELATED 113 197 IPR047126 -
Phac8g02094 269 SUPERFAMILY RING/U-box 133 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02094 Phac-Chr8 28003581 28004845 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02094 134 195 C3H Transcription Factor Family AT2G44330 38.889 3.10e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02094 - K11982 vum:124826385 298.901