Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02092 ATGGTTAAGCCTGAGAACAAGATCCACACAGAATCATCAAAGCCATTGAGAGCACTATCTTCCTCATCATCACCACCATCAAGTGACAGCAAGAAGAAGTACAAGGGAGTGAGAATGAGAAGCTGGGGCTCATGGGTGTCAGAGATTAGAGCACCAAACCAAAAAACTAGAATATGGTTGGGATCTTATTCAACTGCTGAGGCAGCAGCAAGAGCCTATGATGCTGCACTACTTTGCCTTAAGGGCTCCTCAGCCAATCTCAACTTCCCTTCAAGCTCCTCACACTACATTCCTCAAGACACTCTCATGTCCCCAAAATCAATCCAAAGAGTGGCTGCAGCTGCTGCCAACAATTTTTTGGACAATGCTACTGTTGCTACCACCCCATCTTCTCCACCTTCTCCTCCTCTTGCTTCAACCTCTTCCTCTTCATTGGTCTCTTCCCCTTCAATGTCATCATCTCCCTCAGACCAAATTGATGATGATGTCTCACTTCTGTCACCATTTGGGGCCTACATTCCTCCTCCCCCTACTATTAACTCTGATCAACCAAATGATTCAATGGCTATGATGGAATCTTGGTATGGCTTGGAGGAGTTACAATCCCCAAAATATGTTGAGCAAATGCTAAGTGGGGCGTTCTTTGACATTGATTCAACACAGTTGCTTGATGATCTGTATGAAGAAAGTGATATCCGTTTGTGGAGCTTCTGCTGA 717 0.4505 MVKPENKIHTESSKPLRALSSSSSPPSSDSKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANLNFPSSSSHYIPQDTLMSPKSIQRVAAAAANNFLDNATVATTPSSPPSPPLASTSSSSLVSSPSMSSSPSDQIDDDVSLLSPFGAYIPPPPTINSDQPNDSMAMMESWYGLEELQSPKYVEQMLSGAFFDIDSTQLLDDLYEESDIRLWSFC* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02092 238 CDD AP2 34 92 IPR001471 GO:0003700|GO:0006355
Phac8g02092 238 MobiDBLite consensus disorder prediction 1 37 - -
Phac8g02092 238 ProSiteProfiles AP2/ERF domain profile. 33 90 IPR001471 GO:0003700|GO:0006355
Phac8g02092 238 FunFam ethylene-responsive transcription factor ERF014-like 32 92 - -
Phac8g02092 238 SMART rav1_2 33 96 IPR001471 GO:0003700|GO:0006355
Phac8g02092 238 MobiDBLite consensus disorder prediction 137 159 - -
Phac8g02092 238 Pfam AP2 domain 33 82 IPR001471 GO:0003700|GO:0006355
Phac8g02092 238 Gene3D AP2/ERF domain 32 91 IPR036955 GO:0003700|GO:0006355
Phac8g02092 238 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700|GO:0006355
Phac8g02092 238 PRINTS Ethylene responsive element binding protein signature 56 72 IPR001471 GO:0003700|GO:0006355
Phac8g02092 238 MobiDBLite consensus disorder prediction 125 159 - -
Phac8g02092 238 MobiDBLite consensus disorder prediction 13 30 - -
Phac8g02092 238 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 21 171 - -
Phac8g02092 238 SUPERFAMILY DNA-binding domain 33 91 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02092 Phac-Chr8 27976064 27977231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02092 1 237 AP2-EREBP Transcription Factor Family AT1G21910 46.970 1.76e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac8g02092 AP2 5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02092 - - gmx:100813313 300.441