LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac8g02086	ATGGACAGAGAATTGCAATGGACCCTAGTTTTAGCAATTTGTGCTTCATCACTCTTTAATATACTTGCTCAGAACACTCAACTCACTTACAGGAACCTTGCTATTGATTATTCAGGTGTTATAAGCATTGACTGTGGGGTAAACGAGGGCTACACTGACAAAACAACCAACTTACAGTATGAAGCAGATGATATCCAATTTGGTGAAATCTATAATACATCCTCAATTTGCAACATGAATGTAAGTCAAATTCAGAAGCAGTTGAACACGCTGAGAAGTTTCCCATATGGGAAGAGAAATTGCTATACCTTGACACCCAAACAGGGAAAGAATAAGAAATACATAATCAGGGCTCACTTTGCATATGGAAACTATGACAACAAAAATAAAGCACCAGTTTTTGATTTGCATCTTGGAGTCAATTTCTTCAAGACAATAAACTCTACTGAGGCTGAGGTAATTCGAATCGAAGCTATTCATTTTGCCTCAACAGAAACAATCGATTTATGCCTTGTGAACACCGATCAAGGGGTGCCCTTCATTTCATTGTTGGAGCTATGGCCATTGGACAATTCCATTTATCAAAGTTCTTCCACTTTGTTAACACTAGATCTCCTCACACGGCTTAACCTTGGTGCCTCTGAAGATAACTTTATCAGGTACACAGATGATATATATGGAAGGTCATGGGAAGTTCCAAACAATTATACCAAGAATTCATTGAAAACCTCATCAGCTATTGATTTGGATAAACTTGTTGATCCTTACAAACTGCCAGCAGAAGTTTTGAGTTCTGCAGTGGAGGCATTAGATTCCAAGTCCTTGGAATTCACACTCAATTATGCCATGGATTCTGAATATTACGTTTATCTTCATTTTTTTGACTTTGAGGATCGGACAAATAAACAAAAACGAAGATTGAATATTGTTATTAATGATTTTGATGATAATAATGTGAAACAAATTCTTACTCTTTCATACTGGAAGCCCTATAGCATTATTCTACCTATAAAACACGGGATGGGTATTCGGAATATATTGATTGAAGCCGACACTGATTATGAGTTACCTGCAATGCTTAATGCTCTTGAGATTTACAGAGTAGTACCTCAGTCAGATTCTTCCACACAACAAGAAGATGTTGATGCTATCTGGCACATCAAAGATGTTTATATGATCAATAAAATGAATTGGCAAGGAGACCCCTGTGGACCAAAGAATTTTACATGGGAAGGTGTGAAATGCAGCAATGGGAACACTCCAAGAATCATTTCATTAAACTTGAGCTCAAGCAAGTTGTCAGGAGAAATAGATTCCTCCTTCTCCAACCTCAAATGTTTGGAGACTTTGGATTTGTCAAACAATGAATTGACAGGGGAGGTGCCAGAATATTTTGCAAAACTACCACAATTGCAGTTCCTTAACTTGTCCAGGAATATCCTCACAGGTTCAGTTCCTGAGGGTCTAAAGGCAAAGTCCTCTAATAACTCTTTGCAATTGAGTTTGGATGGAAATCTCTGTCCCTATGAGACAGGGTCATGCAAGAGCAACCACAAGTTTATCATTCCATTAGTTGCATCTATGACAGCATTTGTTGTTGTTGTCCTCACAATATCTACCGTAGTTATGGTGATCTGGAGACTTAGAAAAAAGGGAAAAGTGATTTCTTCAATTTCTGTCAAAGATGAGCTACTGAAATCAACAAATCAAGTATTTTCTTACTCAGAGATTGTTAGAATCACTAATAATTTCACAACAATTATTGGGAAAGGTGGATTTGGTAAGGTTTACCTAGGTACTTTAGAGTGTGAGAAAAGAGTTGCTGTGAAGATACTGTCCTCACCATCAGCACAAGGGTATAAGGAATTTCAATCAGAGGCAAAACTATTGATGCATGTTCATCACAGAAACGTGGTTTCTCTTGTGGGATACTGTGATGAAGGTGACACTAGAGCACTTATCTATGAATATCTACCAGAAGGGAACCTCCTACAAAAATTATCAGATAAGAACCCAAGTTTCTTGGAATGGACGCAAAGACTTAAAATTGCTATGGATGCAGCAAATGGGTTGGACTATTTGCATAATGGATGTAAGCCACCAGTAATTCACAGAGATTTAAAAACATCCAACATCTTACTAGACGAAAATATGCATGCCAAGATTTCTGATTTTGGAGTGTCTAAAACTTTTGCCAATGACAGTGACACTTATGTCACTACTTACCCAGCAGGCACACCAGGTTACCTTGATCCTGAGTAA	2262	0.3775	MDRELQWTLVLAICASSLFNILAQNTQLTYRNLAIDYSGVISIDCGVNEGYTDKTTNLQYEADDIQFGEIYNTSSICNMNVSQIQKQLNTLRSFPYGKRNCYTLTPKQGKNKKYIIRAHFAYGNYDNKNKAPVFDLHLGVNFFKTINSTEAEVIRIEAIHFASTETIDLCLVNTDQGVPFISLLELWPLDNSIYQSSSTLLTLDLLTRLNLGASEDNFIRYTDDIYGRSWEVPNNYTKNSLKTSSAIDLDKLVDPYKLPAEVLSSAVEALDSKSLEFTLNYAMDSEYYVYLHFFDFEDRTNKQKRRLNIVINDFDDNNVKQILTLSYWKPYSIILPIKHGMGIRNILIEADTDYELPAMLNALEIYRVVPQSDSSTQQEDVDAIWHIKDVYMINKMNWQGDPCGPKNFTWEGVKCSNGNTPRIISLNLSSSKLSGEIDSSFSNLKCLETLDLSNNELTGEVPEYFAKLPQLQFLNLSRNILTGSVPEGLKAKSSNNSLQLSLDGNLCPYETGSCKSNHKFIIPLVASMTAFVVVVLTISTVVMVIWRLRKKGKVISSISVKDELLKSTNQVFSYSEIVRITNNFTTIIGKGGFGKVYLGTLECEKRVAVKILSSPSAQGYKEFQSEAKLLMHVHHRNVVSLVGYCDEGDTRALIYEYLPEGNLLQKLSDKNPSFLEWTQRLKIAMDAANGLDYLHNGCKPPVIHRDLKTSNILLDENMHAKISDFGVSKTFANDSDTYVTTYPAGTPGYLDPE*	754

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac8g02086	753	PANTHER	OS07G0107800 PROTEIN-RELATED	41	753	-	-
	Phac8g02086	753	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	702	714	IPR008271	GO:0004672\|GO:0006468
	Phac8g02086	753	PRINTS	Leucine-rich repeat signature	447	460	-	-
	Phac8g02086	753	PRINTS	Leucine-rich repeat signature	468	481	-	-
	Phac8g02086	753	Gene3D	-	203	366	-	-
	Phac8g02086	753	Pfam	Leucine rich repeat	425	479	IPR001611	GO:0005515
	Phac8g02086	753	Pfam	Protein tyrosine and serine/threonine kinase	585	741	IPR001245	GO:0004672\|GO:0006468
	Phac8g02086	753	FunFam	Leucine-rich repeat receptor-like protein kinase	559	657	-	-
	Phac8g02086	753	Gene3D	Ribonuclease Inhibitor	386	502	IPR032675	-
	Phac8g02086	753	Gene3D	Transferase(Phosphotransferase) domain 1	658	753	-	-
	Phac8g02086	753	FunFam	Leucine-rich repeat receptor-like kinase	379	508	-	-
	Phac8g02086	753	Gene3D	Phosphorylase Kinase; domain 1	564	657	-	-
	Phac8g02086	753	SUPERFAMILY	L domain-like	407	493	-	-
	Phac8g02086	753	ProSitePatterns	Protein kinases ATP-binding region signature.	588	610	IPR017441	GO:0005524
	Phac8g02086	753	Pfam	Malectin-like domain	43	368	IPR024788	-
	Phac8g02086	753	FunFam	Os07g0541700 protein	661	746	-	-
	Phac8g02086	753	SUPERFAMILY	Protein kinase-like (PK-like)	566	753	IPR011009	-
	Phac8g02086	753	SMART	serkin_6	582	753	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac8g02086	753	ProSiteProfiles	Protein kinase domain profile.	582	753	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac8g02086	Phac-Chr8	27825976	27834175	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac8g02086	34	753	Receptor kinase-like Gene Family	AT2G19230	42.590	0.0	540

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Phac8g02086		Malectin_like	6.8e-80	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac8g02086	-		-	mtr:11437028	816.994