Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02071 ATGAAGGATACAAACACGCCGAACCGCATGCAAAAAGTGGACACAGATTCTCCTGCATGTGAAAGCTCCAAGATGAACACTCCACCAAAACTCACCCCAAGAAAACGAATTTCCAAGAATAACACGCCTAAGAAGAACAGCACGCCTAGGAAGGCTAGCAAGCCGAATAAGACGCTTAAGAAAACTGGATCAGCTTCACCAGGATCTGCTCAAAAGATTGATCTGAGGTTGGAGGCAAAGTTGTCGGCGGAGGTTTATGCAAAGGTGTATGCAGGGCTGAAAATACATCCCTTCTTTTCCCTATGGAAGGAGGAAAATGAACGCCAGCGAGCTTTACTTGCGGCTAAGAAAAAAGGAAAAGGAATTGCTGGTTCTATTCATGTATTTGAAAATGTTCAGGATGATGCCTCACCCATTGACTGGAGTGACTGGACATTTTTGGATAATACCAGAGTTGCTTATTCTGGAGAGAGTTCAAATTTATCTTTTATGGAAGGTTCCGTTGAATCCTTAAATCTTGATAACATACCTAGTGCTTCAAGACTCTCAAGTGCTTCAATCATTAAGAATGTCATGTCTTGTCCAAGTCAACTTTCTATACAGCCAGATAGTATGCAGGAAATATCACCACCAAATTCAATTGTGTTAGAGAAAACAAAATGTCATTTGAAGCCAAAAGATGTCAAAGTGGATCTGGGCTTGGAGGTGAATGAAAATACCTTTTCAGGACACATGGGCATTTTCAGAAGGCCGGATAGTGAGCCACAGTGTAAATTTCTTCAAGCAAGCATGAGATCTTACTACCATAGTTCTGAAGGTAAAAGCAGCTTATGGATGCATAAGTACAAGCCAACAAAAGCCTTTGAGGTGTGTGGTAATGAAGAGGCTATAAATTTCTTGCGTGACTGGTTAGATCTTTGGCATAAAAGACTTTATCAGAGCAGAAAAGGTTCCTCTAACAAGGGTCAAAGTAAAAGGCAAGATGATGGTTCTGACTCAGAAGATATTCATGAGAGTCCCCTACAGAGTGTTCTCTTGGTTACAGGACCAATTGGGAGTGGCAAGTCTGCAGCTGTCTATGCTTGTGCCCAAGAGCAAGGGTTTAATGTCTTAGAGATCAATGCATCAAGTTGTCGAAATGGGGCTGCTATCACTGCTATCAAGAATAAATTAGAAGAACCTAGTGTGGGCAAAATCACAAGTTGTTTCAAACCTGTGAAGTCGCTTCCTGCTGCCAAGAAGATGGATGATTGGGCGATTGCTTCCAGTTCTATTGATGAACGCCGCCAAACTTTAATTCTAGTTGAGGATGTGGGCATCATTTTTCCTGAAGATCGTGGATTTATCACTGCTATACAACACTTTTCTGCGACAGCAAAATGGCCTATTATATTGACCAGCGATAGAAATAATGGTGGCCTACCAAACAGTTTTGCAAGACTACATGTTTCTTTCTCATTTACATTGTCAGATGAGTTACTGTGCCATTTGTACAAGGTTTGCATCACAGAAGATGTCAATATCGATCCTCTTCTACTGAAAAAATTTATCCAGTCTTGCGATGGAGATATTCGGAAAACCATTATGCAACTTCAGTTCTGGTTCCAGAGTAAAAAACATAGCAAAGACAGGAAAGTGCCAAAGGTGTATGGTTTGCTTCCTTTTGATCTTGAGGCTTGTCACAAGATTATACCGAAGATACTGCCCTGGAATTATCCCTCAGAGTTGTCCCAACTAATTGAGAAGGAAGTTGCTAAGTCAATAGCCACAATGGATGAAAACTCGTGCTTGCAGGGGTCAGTTAACCAAGAGCTAGACATAAATGAAATGAAAAAGGATTTAGATGTGAAGTGTATGAATACTGATTATTTAGAGGCCAAGGTAAAGAGAATCAAGAGATCTCTTACATACCACAATGGGGTTGAAAGTCAACATAGTGCTATTTCTGAATTTTCAAATTGTTCTGGATCCCCGGTAACATCCTCTTGGCAAAAGGATCAAAGTAAACTTGGTTCTGAGAAGGATCCACATAATGCACATTCTTTAGACGTTCATGAGGAAGTTTACAAGACACATTCCCTGGAAAGCAACAGTGAATATCTCTCTAAGTTTCAAATGAATCAAAAGTATCCAAGTACATTATTTTATGCATCCTGTTCCGTTCCTGAGACAGCAATTCAAAAGGGAATAAAGCCATTGTCTGGATCAGTGTCTTCTTGCTGTCATGCTGGTCCAGTAGAAGTATCTCTTAATAATGAGCAGACACCGATCACTTTGAGTGTTTGTCAGTCCTTAGACAAATTGCCACAAAATTCTGATCCATTTGCAAATACTGAAATTCCAGAATCTTCTTCGACAAAAGCAGCTGTGCAAAATTTCAGAGATGAGAACACGAAAACCACAACTGTGAGTAATGTGATAGATGGGCGCAGTCATGCTGATTTTATATCAAACTCAAAGTTTCTTGACTCCAGTCCATCTGTGCCGATGGATATGATACAAAAATTGTGGAGGGAACTTCGTATATGTCAAAAGGACTTAGGACAGCATGCCAACTCAGAACAGCCGAATGTTATCCAAGTTCTTAGACTTACAAGTGGGTTGACCGATCTAATTTCTGAAGCTGACTTATTGTTTCATAATCACCAACAAAAACAATGTGGTATTATGGAGCCTCCAGTGACCCTTTTTGATGAAGCCACAAAGAGTTGGTATGATGAGCAAGTGATGATGTCTACTGTTGCTGCACATGGCTTTTCCTTTTATGCCAAACATATATCAGAGGTAGGATCCGAGTTTGGTTGTAAGAACGAGGTAGATCTAATCTCGGAGATGTTGGATAGCACTACTAATGTTATGGCACTGGGAAAATTATCTAGACAGGACCAAACAAAAAGCACTAGTATCTATGACAGTAAGCTATTAGAGATGAATGACCCGACAAATGATACGAATAGAACATCTTTTTCCAAAGTGATCCGGTCTATCATTCCAGCAAGATCATCCTTGTCAGTGAAAGGTCTTGCATTAAGTGAATACATGTCTTCACTACGCCAAATCTCAATTTCGGAAGGTTTCCGCATTTCACATGGTTCAGAAAATGTGAGAAAACGAAGGCGGGTTGGTACACATTATTTGAGCAAAGGTAGAATGAAGTTGACTCCTGAAGATATATCAGTGGTGTGCAAAGGTGGCTTGTACAGAAAGAATTATTCGCAATACATAGCTAACATGGAAAGGAAACCTGCATGA 3252 0.4025 MKDTNTPNRMQKVDTDSPACESSKMNTPPKLTPRKRISKNNTPKKNSTPRKASKPNKTLKKTGSASPGSAQKIDLRLEAKLSAEVYAKVYAGLKIHPFFSLWKEENERQRALLAAKKKGKGIAGSIHVFENVQDDASPIDWSDWTFLDNTRVAYSGESSNLSFMEGSVESLNLDNIPSASRLSSASIIKNVMSCPSQLSIQPDSMQEISPPNSIVLEKTKCHLKPKDVKVDLGLEVNENTFSGHMGIFRRPDSEPQCKFLQASMRSYYHSSEGKSSLWMHKYKPTKAFEVCGNEEAINFLRDWLDLWHKRLYQSRKGSSNKGQSKRQDDGSDSEDIHESPLQSVLLVTGPIGSGKSAAVYACAQEQGFNVLEINASSCRNGAAITAIKNKLEEPSVGKITSCFKPVKSLPAAKKMDDWAIASSSIDERRQTLILVEDVGIIFPEDRGFITAIQHFSATAKWPIILTSDRNNGGLPNSFARLHVSFSFTLSDELLCHLYKVCITEDVNIDPLLLKKFIQSCDGDIRKTIMQLQFWFQSKKHSKDRKVPKVYGLLPFDLEACHKIIPKILPWNYPSELSQLIEKEVAKSIATMDENSCLQGSVNQELDINEMKKDLDVKCMNTDYLEAKVKRIKRSLTYHNGVESQHSAISEFSNCSGSPVTSSWQKDQSKLGSEKDPHNAHSLDVHEEVYKTHSLESNSEYLSKFQMNQKYPSTLFYASCSVPETAIQKGIKPLSGSVSSCCHAGPVEVSLNNEQTPITLSVCQSLDKLPQNSDPFANTEIPESSSTKAAVQNFRDENTKTTTVSNVIDGRSHADFISNSKFLDSSPSVPMDMIQKLWRELRICQKDLGQHANSEQPNVIQVLRLTSGLTDLISEADLLFHNHQQKQCGIMEPPVTLFDEATKSWYDEQVMMSTVAAHGFSFYAKHISEVGSEFGCKNEVDLISEMLDSTTNVMALGKLSRQDQTKSTSIYDSKLLEMNDPTNDTNRTSFSKVIRSIIPARSSLSVKGLALSEYMSSLRQISISEGFRISHGSENVRKRRRVGTHYLSKGRMKLTPEDISVVCKGGLYRKNYSQYIANMERKPA* 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02071 1083 Gene3D - 275 488 IPR027417 -
Phac8g02071 1083 MobiDBLite consensus disorder prediction 1 70 - -
Phac8g02071 1083 MobiDBLite consensus disorder prediction 321 336 - -
Phac8g02071 1083 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 490 551 - -
Phac8g02071 1083 MobiDBLite consensus disorder prediction 10 49 - -
Phac8g02071 1083 Gene3D - 491 549 - -
Phac8g02071 1083 MobiDBLite consensus disorder prediction 659 680 - -
Phac8g02071 1083 MobiDBLite consensus disorder prediction 315 337 - -
Phac8g02071 1083 Pfam ATPase family associated with various cellular activities (AAA) 345 391 IPR003959 GO:0005524|GO:0016887
Phac8g02071 1083 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 276 539 IPR027417 -
Phac8g02071 1083 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 19 1070 IPR004582 GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02071 Phac-Chr8 27558932 27580912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02071 278 533 Core DNA Replication Machinery Family AT5G22010 23.846 1.54e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02071 K26118 - gmx:100815984 1337.78