Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02064 ATGATGGAAGAAGGGGAGATGGTAAGATCCGGTTGTCAGCTGTTTTGTTTGGAGAGTTTGGCTGAATCACTAAAAACATTAGGTAACAACGCAATGCAATTTAAGAAATACAATGATGCAATTGAGTTGTATAATTGTGCCATTGCAGTCAAGGAAAATAATGCTGTTTACTTCTGCAACAGGGCAGCTGCTTACACTCAGGTTAACAAATATTCTGAAGCAATTCTAGATTGTCTTAGATCTATCAAGATTGACTCAAACTACAGCAAGGCATACAGTCGTCTGGGTTTGGTTTATTATGCTCAAGGAAATTACAGGGAGGCCCTTGATAAAGGGTTTAGAAGAGCCCTGCAGTTGGATCCAAATAATGAATCTGTGAAAGAAAATATACGGGTGGCTGAGCAGAAATTGTTAGAAGAGCAACACCGTGCACATCACAACCAGAGTTCAACAAGGTCATCTCGAGAAGTTCCAAACCAATCTGCACAAGGATCAAGAAGCCAGGGGAGGCCACGTACATTTTCTACTACTACTACGTCTTCTTCTACGTCTTCTACTACGACGGTTCATCCCACCACTACTACTCGGCGTACGACTACTGAAATTTTAAACATGGACCAAATTCCGGAGAATCTAAGAGGGCCCTTTATGATGGCAACGTTATCTAGGACTGTAACCCCTGGCCAACCACATGATCAAACCAATCGAAGAACAGGACCAAACTAA 726 0.4201 MMEEGEMVRSGCQLFCLESLAESLKTLGNNAMQFKKYNDAIELYNCAIAVKENNAVYFCNRAAAYTQVNKYSEAILDCLRSIKIDSNYSKAYSRLGLVYYAQGNYREALDKGFRRALQLDPNNESVKENIRVAEQKLLEEQHRAHHNQSSTRSSREVPNQSAQGSRSQGRPRTFSTTTTSSSTSSTTTVHPTTTTRRTTTEILNMDQIPENLRGPFMMATLSRTVTPGQPHDQTNRRTGPN* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02064 241 ProSiteProfiles TPR repeat profile. 21 54 IPR019734 GO:0005515
Phac8g02064 241 SUPERFAMILY TPR-like 20 134 IPR011990 GO:0005515
Phac8g02064 241 Coils Coil 123 143 - -
Phac8g02064 241 SMART tpr_5 89 123 IPR019734 GO:0005515
Phac8g02064 241 SMART tpr_5 55 88 IPR019734 GO:0005515
Phac8g02064 241 SMART tpr_5 21 54 IPR019734 GO:0005515
Phac8g02064 241 MobiDBLite consensus disorder prediction 141 201 - -
Phac8g02064 241 PANTHER LD24721P 18 179 IPR047150 -
Phac8g02064 241 MobiDBLite consensus disorder prediction 151 201 - -
Phac8g02064 241 ProSiteProfiles TPR repeat profile. 89 123 IPR019734 GO:0005515
Phac8g02064 241 Gene3D Tetratricopeptide repeat domain 18 176 IPR011990 GO:0005515
Phac8g02064 241 Pfam TPR repeat 64 103 - -
Phac8g02064 241 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 16 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02064 Phac-Chr8 27398373 27401389 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02064 19 190 U-box Gene Family AT3G07370 25.698 1.95e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02064 K16365 - gmx:100799770 278.1