Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02021 ATGGCAGGTTTCAGTGGCGACGAAACCGCTCCTTTTTTCGGCTTCCTTGGCGCGGCCGCGGCTCTCGTTTTCTCCTGTATGGGAGCAGCGTACGGAACTGCGAAGAGTGGGGTGGGAGTGGCGTCGATGGGTGTGATGAGGCCGGAGCTTGTGATGAAGTCGATTGTGCCGGTGGTTATGGCTGGAGTGTTGGGGATCTATGGGTTGATTATTGCGGTCATCATTAGCACTGGGATAAACCCCAAGGCTAAGTCTTACTATCTATTTGATGGCTATGCCCACTTGTCCTCCGGCCTTGCCTGTGGCCTTGCTGGCCTCTCTGCTGGGATGGCCATTGGAATTGTTGGGGATGCTGGTGTTAGGTATTGA 369 0.5474 MAGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRY* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02021 122 Pfam ATP synthase subunit C 16 75 IPR002379 GO:0015078|GO:0033177|GO:1902600
Phac8g02021 122 PRINTS Vacuolar ATP synthase 16kDa subunit signature 106 122 IPR000245 GO:0033179|GO:0046961|GO:1902600
Phac8g02021 122 PRINTS Vacuolar ATP synthase 16kDa subunit signature 29 53 IPR000245 GO:0033179|GO:0046961|GO:1902600
Phac8g02021 122 PRINTS Vacuolar ATP synthase 16kDa subunit signature 55 79 IPR000245 GO:0033179|GO:0046961|GO:1902600
Phac8g02021 122 NCBIfam V-type ATPase subunit C 12 120 IPR011555 GO:0033179|GO:0046961|GO:1902600
Phac8g02021 122 SUPERFAMILY F1F0 ATP synthase subunit C 12 76 IPR035921 -
Phac8g02021 122 Gene3D - 10 122 IPR035921 -
Phac8g02021 122 FunFam V-type proton ATPase proteolipid subunit 10 122 - -
Phac8g02021 122 CDD ATP-synt_Vo_c_ATP6C_rpt1 12 79 - -
Phac8g02021 122 SUPERFAMILY F1F0 ATP synthase subunit C 86 120 IPR035921 -
Phac8g02021 122 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 4 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02021 Phac-Chr8 26712230 26715284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02021 2 121 Primary Pumps ATPases(2) AT1G75630 99.167 1.69e-79 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02021 K02155 - gmx:100777816 216.083