Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02009 ATGCCTTTTTGCCAGATTTCTCACACACACAACACTACCTTTCCTCAATCTTCGCGTTCACACATTCCCCTATTTCTTCACACGAAACCAACACACTTTCTTCTCAAACCAAACACTAATACACTCATGGAACAACAACAACAAAACAGCATCCTATGCAAATACACTGTACACCGATGTTTGATGAAAAAACACACAAAACCAAAAACTACTTCGCGTTCGCCCAAAGTCATTTCCATATCCGTAACCGATCCATTCGCCACGGACTCATCCAGCGACGATGAAAAACCCCCTCGCCGAAGAGTGAAGCGCTACGTCAACAGAATCGAACTTCCACTCGCGTGCAAAGCAGTCGCTTCTAAGAAGAGACACGCCGGAGAAAGCACTACTATTCGGACGCCGGAGCCGGGGAGAGTGGAGAATTCCGGGAACGGGAAGAAGTTCCGCGGCGTGCGGCAGCGGCCATGGGGGAAATGGGCGGCGGAGATAAGAGATCCCGCGAAGCGCATGAGGATCTGGCTCGGAACTTTCGACACCGCCGAGGAAGCTGCATTGGTTTACGACAATGCCGCGATTACGCTTCGCGGCCCTGACGCATTAACGAACTTCGCGACGAACCAGGAGAAGGAAGCAGCAGAGAAAGAAGACCCCGCCGGAAAACGGGAAATGAACGTGGTGGTGAAGCCGGAAAACGAAGTCTCCGATTACGACTCAAGCGAGGAGTGCTGTCACAACCTCCCTTCGCCCACGTCGGTTCTCCACTTCAACGACCCGGAGAAACCGGAACAGACGTTTGCTGGTCGAAGTGGAGCGGTGGAAGAGTTCGAAGGCGAGATGATATCGTTTCACGAAAACAGGGAATTTTTGTTACAGGACTTGGTGTGGGATGACGTGTTTAACTTTCCCGTTATCTTTGACGAGCCTGTTTCGCACTTGTTTGACGAAACGACGCGGTTTTCGGTTAATGACAGTTTCGTTGCTATTACAGATTCTGAAGAAAAATACTCGCCGTCAACGTCTTTGTGCCAAGTAGACGATTATTTCCAAGACATTTTGTTAGGGTCAGATCCTCTGGTGGCTCTGTGA 1086 0.5018 MPFCQISHTHNTTFPQSSRSHIPLFLHTKPTHFLLKPNTNTLMEQQQQNSILCKYTVHRCLMKKHTKPKTTSRSPKVISISVTDPFATDSSSDDEKPPRRRVKRYVNRIELPLACKAVASKKRHAGESTTIRTPEPGRVENSGNGKKFRGVRQRPWGKWAAEIRDPAKRMRIWLGTFDTAEEAALVYDNAAITLRGPDALTNFATNQEKEAAEKEDPAGKREMNVVVKPENEVSDYDSSEECCHNLPSPTSVLHFNDPEKPEQTFAGRSGAVEEFEGEMISFHENREFLLQDLVWDDVFNFPVIFDEPVSHLFDETTRFSVNDSFVAITDSEEKYSPSTSLCQVDDYFQDILLGSDPLVAL* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02009 361 FunFam Ethylene-responsive transcription factor 2 146 205 - -
Phac8g02009 361 Gene3D AP2/ERF domain 146 206 IPR036955 GO:0003700|GO:0006355
Phac8g02009 361 PRINTS Ethylene responsive element binding protein signature 148 159 IPR001471 GO:0003700|GO:0006355
Phac8g02009 361 PRINTS Ethylene responsive element binding protein signature 170 186 IPR001471 GO:0003700|GO:0006355
Phac8g02009 361 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 74 260 - -
Phac8g02009 361 MobiDBLite consensus disorder prediction 65 102 - -
Phac8g02009 361 ProSiteProfiles AP2/ERF domain profile. 147 204 IPR001471 GO:0003700|GO:0006355
Phac8g02009 361 CDD AP2 146 204 IPR001471 GO:0003700|GO:0006355
Phac8g02009 361 SMART rav1_2 147 210 IPR001471 GO:0003700|GO:0006355
Phac8g02009 361 MobiDBLite consensus disorder prediction 121 151 - -
Phac8g02009 361 MobiDBLite consensus disorder prediction 72 88 - -
Phac8g02009 361 Pfam AP2 domain 147 196 IPR001471 GO:0003700|GO:0006355
Phac8g02009 361 SUPERFAMILY DNA-binding domain 147 205 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02009 Phac-Chr8 26434951 26436895 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02009 53 353 AP2-EREBP Transcription Factor Family AT4G27950 38.462 7.23e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac8g02009 AP2 1.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02009 - - gmx:100805277 391.734