Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02005 ATGGCTAGGAGCTGGCTTATTGACTTTGGAGGATTTGCAAAGAAAGTGAAAAACAATTCTCTATCTTCGGCTGATCAAATCAAGGATTGTGGGGCATATCGAGAATGTCCTAACTGTCATTATCGTATTGAAAACAGTGATGTTTCTAGTGAGTGGCCTGGCTTTCCTCTTGGTGTAAAGTTTGATCCTTCTGATGTAGAACTCTTAGAACATTTAGCAGGAAAATGTGGTGTTGGAAACACACAGCCAGATATGTTTATCAACGAGTTCATCACAACTCTGGAAGGAGACCAAGGTATTTGCTACACTCATCCAGAAAATCTTCAAGGTGCTAAGAAAGATGGGAGTTATTTCCATTTCTTTCACAGGACAATCAATGCTTATGCTACTGGTCAAAGAAAGCGAAGAAAGATTCATCATCAACAGGGTGTGACTGAAGAACATTGGCGTTGGCACAAGACTGGTAAGACGAAAGCTATAATAGAAAATGGAATTTGCAAAGGCTTTAAGAAAATCATGGTTCTTCATGTAAGATCTAAGAGTGGGTTCAAACCCTACAAATCCAACTGGGTAATGCATCAGTATCATCTAGGGACTGAAGAAGATGAAAAGGAAGGTGAATATGTGGTTTCTAAAATTTTTTATCAACAGCAAAAGAAGACTGAGAAAAATGAGGACAATCCAATGGTTGAAGATCCTGACAATATAGTGTCAAGAACAAGTCCAAGGACTCCAAAACCAAATCCCCCCAATCCACCTCGTGCCGGAAACTCGGTTGATTGTGATGATTACATTGATGAAACTGTACCTCTGCCTTCTGCCCAGGATACCAAGGTAATCCTTGGAGAATCACTTGCCCCAATATCTGATAATCACGACCTAAACAGTTCTGCATGGTTAGCTGGCGAATCACAAGCTGTGGAACACATTGAATATGATGGCTTGGACGACATATTATTGTGCAAGGAAATCTTAGATTCTTCTGCTCTGTTAAATGATTCTGGATTAGACTCCAGCAATCTCTATGACTTAGCATTCTATGATAACCAAATGGCTAGAAATGATAACGAATCTTGCGGAATTTCTGTCCTGGATACGCTGGAATTAGACACTCCAGATTTTGATCTTTCTAATTTGAATTTTTGTTCTCAAGACAGTGTCCTTCAGTGGATGGGAAGGTTGTGA 1185 0.3983 MARSWLIDFGGFAKKVKNNSLSSADQIKDCGAYRECPNCHYRIENSDVSSEWPGFPLGVKFDPSDVELLEHLAGKCGVGNTQPDMFINEFITTLEGDQGICYTHPENLQGAKKDGSYFHFFHRTINAYATGQRKRRKIHHQQGVTEEHWRWHKTGKTKAIIENGICKGFKKIMVLHVRSKSGFKPYKSNWVMHQYHLGTEEDEKEGEYVVSKIFYQQQKKTEKNEDNPMVEDPDNIVSRTSPRTPKPNPPNPPRAGNSVDCDDYIDETVPLPSAQDTKVILGESLAPISDNHDLNSSAWLAGESQAVEHIEYDGLDDILLCKEILDSSALLNDSGLDSSNLYDLAFYDNQMARNDNESCGISVLDTLELDTPDFDLSNLNFCSQDSVLQWMGRL* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02005 394 Pfam No apical meristem (NAM) protein 56 197 IPR003441 GO:0003677|GO:0006355
Phac8g02005 394 Gene3D NAC domain 64 221 IPR036093 GO:0003677|GO:0006355
Phac8g02005 394 ProSiteProfiles NAC domain profile. 55 216 IPR003441 GO:0003677|GO:0006355
Phac8g02005 394 FunFam NAC domain-containing protein 8 64 220 - -
Phac8g02005 394 MobiDBLite consensus disorder prediction 219 261 - -
Phac8g02005 394 SUPERFAMILY NAC domain 40 216 IPR036093 GO:0003677|GO:0006355
Phac8g02005 394 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 308 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02005 Phac-Chr8 26363846 26368358 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02005 33 220 NAC Transcription Factor Family AT4G28500 52.105 4.15e-63 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac8g02005 NAM 1.9e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02005 - - gmx:100780442 627.861