Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02002 ATGGAATATGGCAAATTGGGGCCCGCCGACCCAGGTGGCTCCTCCCGCCGCTCCACCACTCCTCTTACCAAACCAACCCCCTCTTCATCCTCCGCAACCACCAAAAGAAAACTCATCATGCTCTCTCTTCTCGCAACCGCCTTAATCGTCGCCGCTGCGATCTCCGCCGTCCTCGTCACCGTGGTCCGCTCCCGCGCCTCCAGTAACCAAAACGGGCCCGGCCTATCCCGCAAGCCTACTCAGGCAAGACTCATTTTTTTTTTATCCGCAATTTCCCGAACCTGCAGCAAGACACGTTTCCCCACCTTATGTGTCAACTCCCTTCTTGACTTTCCCGGCTCCACCACTGCCTCGGAGCAAGATCTCGTCCACATCTCATTCAACATGACCCTACGACACGTCAGCAGAGCGTTCTTCGCCTCCTCTGGCCTCTCCTTCGCGGCCACCGAACCCAAAGTTCGGGCTGCATACGAAGATTGCCTCGAGTTATTGGAGGAGTCCATGGACGCTCTTTCCCGATCCCTGGACTCCATCCTCTCGCCTTCGGCTATATCTAACAGCGGCGGATTGAGATCTGGCTCTGATGGATCTACCGAAGATGTGATAACGTGGCTCAGCGCCGCTCTCACTAATCATGACACGTGTGCGGAGGGGTTCGAGGAGTCGAGCGGCAGCCTGAAGAACCAGATGGTTAATAACTTGAAGGACTTGTCTGAACTGTTGAGTAATTGTCTCGCGATATTTTCTGGGAGTGGAAGTGGCGATTTCTCGGGGGTGCCGATTCAGAATAAGAGACGATTAATGGGAGAGGAAGATGATGAAGCGAATGTTTACGACGATATATCGGGGAAATTCCCGAGATGGTTGAATAACCATGATAGAAGATTATTGAAGTTAGCAACGTCAGCAATTCAAGCGGATATAGTGGTGTCTAAGAATGGTGAAGGAACAGTGAAGACAATTGCGGAGGCTATTAAGAAAGCGCCGGAACACAGCAGTCGCCGGTTCATCATTTACGTGAGGGCAGGAAGGTATGAGGAGAATAATTTAAAGGTGGGCAGAAAGAAAACGAATGTGATGTTCATAGGAGATGGGAAGGGCAAAACTGTCATTACAGGGAAAAAGAATGTGATAGACGGCATGACCACATTCCACACAGCATCCTTCGCTGCAAGTGGTGCTGGATTCATTGCACGAGACATCACGTTCGAGAACTATGCTGGACCGGCAAAGCACCAAGCGGTGGCGCTCCGTGTCGGAGCCGACCACGCGGTGGTGTACCGGTGCAACATTGTGGGGTACCAAGACTCATGCTACGTCCACTCGAATCGTCAATTTTTTCGTGAATGTGACATTTACGGTACTGTAGACTTCATATTCGGCAATGCTGCGGTCGTGTTCCAGAAGTGCAACATATATGCTCGTAAGCCCATGGCCCAACAGAAGAACACCATTACAGCCCAAAATAGAAAAGACCCAAATCAGAATACGGGCATATCCATGCACAATTGTCGGATCCAACCCGCTCCGGATCTTGTGCCGGTTAAGGGCAGCTTCCCCACCTATTTGGGCCGTCCATGGAAGCAGTTCTCCAGAACAGTGTTCATGTTATCCTACATGGGTGACCACATACATTCCCGTGGATGGTTGGAATGGAATGGAGACTTTGCTTTGGACACATTGTATTATGGTGAGTACATGAATTATGGGCCCGGTGCAGGTGTAGGCCAACGGGTCAAATGGCCTGGGTATCGGGTCATTACCTCTGCTGTGGAGGCAAATAGGTTCACGGTGGCCCAGTTTATATCTGGGTCAGCCTGGTTACCATCCACTGGAGTGGCTTTTGCGGCCGGGTTATCCGCATGA 1866 0.5139 MEYGKLGPADPGGSSRRSTTPLTKPTPSSSSATTKRKLIMLSLLATALIVAAAISAVLVTVVRSRASSNQNGPGLSRKPTQARLIFFLSAISRTCSKTRFPTLCVNSLLDFPGSTTASEQDLVHISFNMTLRHVSRAFFASSGLSFAATEPKVRAAYEDCLELLEESMDALSRSLDSILSPSAISNSGGLRSGSDGSTEDVITWLSAALTNHDTCAEGFEESSGSLKNQMVNNLKDLSELLSNCLAIFSGSGSGDFSGVPIQNKRRLMGEEDDEANVYDDISGKFPRWLNNHDRRLLKLATSAIQADIVVSKNGEGTVKTIAEAIKKAPEHSSRRFIIYVRAGRYEENNLKVGRKKTNVMFIGDGKGKTVITGKKNVIDGMTTFHTASFAASGAGFIARDITFENYAGPAKHQAVALRVGADHAVVYRCNIVGYQDSCYVHSNRQFFRECDIYGTVDFIFGNAAVVFQKCNIYARKPMAQQKNTITAQNRKDPNQNTGISMHNCRIQPAPDLVPVKGSFPTYLGRPWKQFSRTVFMLSYMGDHIHSRGWLEWNGDFALDTLYYGEYMNYGPGAGVGQRVKWPGYRVITSAVEANRFTVAQFISGSAWLPSTGVAFAAGLSA* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02002 621 CDD PMEI-like_3 95 247 - -
Phac8g02002 621 PANTHER PECTINESTERASE 54 609 - -
Phac8g02002 621 MobiDBLite consensus disorder prediction 13 31 - -
Phac8g02002 621 Pfam Plant invertase/pectin methylesterase inhibitor 90 247 IPR006501 GO:0004857
Phac8g02002 621 MobiDBLite consensus disorder prediction 1 31 - -
Phac8g02002 621 FunFam Pectinesterase 88 251 - -
Phac8g02002 621 SUPERFAMILY Pectin lyase-like 301 618 IPR011050 -
Phac8g02002 621 SMART PMEI_2 86 247 IPR006501 GO:0004857
Phac8g02002 621 FunFam Pectinesterase 301 619 - -
Phac8g02002 621 NCBIfam pectinesterase inhibitor domain 89 248 IPR006501 GO:0004857
Phac8g02002 621 Gene3D Invertase/pectin methylesterase inhibitor family protein 89 250 IPR035513 -
Phac8g02002 621 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 90 249 IPR035513 -
Phac8g02002 621 Pfam Pectinesterase 307 604 IPR000070 GO:0030599|GO:0042545
Phac8g02002 621 ProSitePatterns Pectinesterase signature 2. 452 461 IPR033131 -
Phac8g02002 621 Gene3D - 300 619 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02002 Phac-Chr8 26306918 26310839 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02002 1 620 Carbohydrate Esterase AT5G53370 61.882 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02002 - - gmx:106796002 1003.82